Miyakogusa Predicted Gene

Lj0g3v0196679.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0196679.1 Non Chatacterized Hit- tr|B9R6Y6|B9R6Y6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.36,3e-19,seg,NULL,CUFF.12459.1
         (543 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036832                                                      92   4e-18
gnl|LJGI|TC66537 similar to UniRef100_A7QL89 Cluster: Chromosome...    74   1e-12

>gnl|LJGI|GO036832 
          Length = 668

 Score = 91.7 bits (46), Expect = 4e-18
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                       
Query: 15  ttcacaatacaacagtgcaagtgaatctggttggacccattactttgaccaaccctctct 74
           ||||||||||| |||||| |||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 175 ttcacaatacagcagtgctagtgaatctggttggacccattacttggaccaatcctcttt 234

                 
Query: 75  ttctga 80
           ||||||
Sbjct: 235 ttctga 240



 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 88/104 (84%), Gaps = 3/104 (2%)
 Strand = Plus / Plus

                                                                       
Query: 382 ttctcagggaatggagcagtggaggatgcattggatttttctccttgtttctctgcaaca 441
           |||||||||||||||| ||| ||   || |||||||||||| |  ||| | |||||||||
Sbjct: 542 ttctcagggaatggaggagtagaaagtgaattggatttttcacaatgtgtatctgcaaca 601

                                                       
Query: 442 agaacaaag---agaaagccaaaattccagaagcacttcagttt 482
           |||||||||   |||||| | |||||||||||||||||||||||
Sbjct: 602 agaacaaagcagagaaagactaaattccagaagcacttcagttt 645



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 145 gatttgtccatggtgtctgatgcttcttctggacctccaca 185
           |||||||||||||| || |||||||||||||||||||||||
Sbjct: 317 gatttgtccatggtttcggatgcttcttctggacctccaca 357


>gnl|LJGI|TC66537 similar to UniRef100_A7QL89 Cluster: Chromosome chr3 scaffold_117,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_117, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 958

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 145 gatttgtccatggtgtctgatgcttcttctggacctccaca 185
           |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 234 gatttgtccatggtttctgatgcttcttctggacctccaca 274