Miyakogusa Predicted Gene

Lj0g3v0196519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0196519.1 Non Chatacterized Hit- tr|C5Y0T2|C5Y0T2_SORBI
Putative uncharacterized protein Sb04g031370
OS=Sorghu,34.97,9e-19,seg,NULL,CUFF.12438.1
         (929 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC599447 similar to UniRef100_Q109B2 Cluster: Expressed...   769   0.0  
gnl|LJGI|TC72450 similar to UniRef100_A7PK29 Cluster: Chromosome...   731   0.0  
gnl|LJGI|TC73268                                                       70   3e-11

>gnl|LJGI|DC599447 similar to UniRef100_Q109B2 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (8%)
          Length = 532

 Score =  769 bits (388), Expect = 0.0
 Identities = 388/388 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggtgcaagaaacacatatcagactccagcagcaccgtcggcgtctgcgccacctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgaggtgcaagaaacacatatcagactccagcagcaccgtcggcgtctgcgccacctgt 204

                                                                       
Query: 61  ctccgggaacgcctcacattcctcatcgcggcccaggcccaagcccaagcccaattatct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctccgggaacgcctcacattcctcatcgcggcccaggcccaagcccaagcccaattatct 264

                                                                       
Query: 121 cgcgactgttcacgaaactccgacgtaaaccctccgccgccgctgatcttccctcgctcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgcgactgttcacgaaactccgacgtaaaccctccgccgccgctgatcttccctcgctcc 324

                                                                       
Query: 181 gtctcgccttacgtctctcgccggaaatccgactactctgcccccggcgcatgccaccac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtctcgccttacgtctctcgccggaaatccgactactctgcccccggcgcatgccaccac 384

                                                                       
Query: 241 agtggcgatcgccgtgaaaatcgtgagaatctcttctacagtactccccaggtcggccca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtggcgatcgccgtgaaaatcgtgagaatctcttctacagtactccccaggtcggccca 444

                                                                       
Query: 301 agcttctacaccggcgcgaacgccggagaagaagcgaggtcgatcaagaagcgtttgagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcttctacaccggcgcgaacgccggagaagaagcgaggtcgatcaagaagcgtttgagc 504

                                       
Query: 361 aagttctggagtttctcgaacttcttca 388
           ||||||||||||||||||||||||||||
Sbjct: 505 aagttctggagtttctcgaacttcttca 532


>gnl|LJGI|TC72450 similar to UniRef100_A7PK29 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 692

 Score =  731 bits (369), Expect = 0.0
 Identities = 369/369 (100%)
 Strand = Plus / Plus

                                                                       
Query: 561 tcgcggaatgtcgccggtgagaatagaggattctcccgatgaatgcgatcagtgtgactc 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcgcggaatgtcgccggtgagaatagaggattctcccgatgaatgcgatcagtgtgactc 60

                                                                       
Query: 621 gtcggagacttcgccgtggtggcggaggacgccgtcgagattggtggtggcgccttcggc 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtcggagacttcgccgtggtggcggaggacgccgtcgagattggtggtggcgccttcggc 120

                                                                       
Query: 681 gcggcgctcccgggtagggcgggggatgaacgtgacgggtttggatattgctttttgtct 740
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggcgctcccgggtagggcgggggatgaacgtgacgggtttggatattgctttttgtct 180

                                                                       
Query: 741 gagtcctctggttcgggctagcccgaaccggaggtggaacaataagggaatgccaccgga 800
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtcctctggttcgggctagcccgaaccggaggtggaacaataagggaatgccaccgga 240

                                                                       
Query: 801 gattgcggcggcggcggatgttagggccaccgcgacgccgaagcctcacctctcggcagc 860
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattgcggcggcggcggatgttagggccaccgcgacgccgaagcctcacctctcggcagc 300

                                                                       
Query: 861 ggcgtcgttttgcgcgaaccgttcccggaagcttgtagattttggacgagtcaatcagaa 920
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcgtcgttttgcgcgaaccgttcccggaagcttgtagattttggacgagtcaatcagaa 360

                    
Query: 921 ccgttgatt 929
           |||||||||
Sbjct: 361 ccgttgatt 369


>gnl|LJGI|TC73268 
          Length = 698

 Score = 69.9 bits (35), Expect = 3e-11
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggtgcaagaaacacatatcagactccagcagcaccgtcggcgtctgcgccacctgt 60
           |||||||||||||||||  || | |||  || ||||||| |||||||||||||| | |||
Sbjct: 304 atgaggtgcaagaaacatttaccggacctcaccagcaccctcggcgtctgcgcctcttgt 363

                          
Query: 61  ctccgggaacgcctc 75
           |||||||||||||||
Sbjct: 364 ctccgggaacgcctc 378