Miyakogusa Predicted Gene

Lj0g3v0196509.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0196509.1 Non Chatacterized Hit- tr|I3SD11|I3SD11_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.83,3e-17,
,CUFF.12443.1
         (142 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80200 similar to UniRef100_A7PK37 Cluster: Chromosome...   236   3e-62
gnl|LJGI|TC74261 similar to UniRef100_A7PK37 Cluster: Chromosome...   178   6e-45

>gnl|LJGI|TC80200 similar to UniRef100_A7PK37 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 732

 Score =  236 bits (119), Expect = 3e-62
 Identities = 138/143 (96%), Gaps = 1/143 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatggggtgaagataatttccatgcttgtggctatctggggtttgg-cctcttatat 59
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 193 atgaatggggtgaagataatttccatgcttgtggctatctggggtttgggcctcttatat 252

                                                                       
Query: 60  ctatcagaattatattgatgatttaaaggcaagacgcacgcaagctgttgtttctaagtc 119
           ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||
Sbjct: 253 ctatcagaattatattgatgatttaaaggcaagacgcgcgccagttgttgtttctaagtc 312

                                  
Query: 120 aagcaatggttcttcgtgttgag 142
           |||| ||||||||||||||||||
Sbjct: 313 aagccatggttcttcgtgttgag 335


>gnl|LJGI|TC74261 similar to UniRef100_A7PK37 Cluster: Chromosome chr15 scaffold_19,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_19, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (88%)
          Length = 1496

 Score =  178 bits (90), Expect = 6e-45
 Identities = 129/142 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaatggggtgaagataatttccatgcttgtggctatctggggtttggcctcttatatc 60
            |||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||
Sbjct: 1108 atgaatggggtgaagataatttccatgcttttggctatctggggttttgcttcatatatc 1167

                                                                        
Query: 61   tatcagaattatattgatgatttaaaggcaagacgcacgcaagctgttgtttctaagtca 120
            ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||||
Sbjct: 1168 tatcagaattatattgatgatttaaagacaagacgtgcgcaagctgttgcttctaagtca 1227

                                  
Query: 121  agcaatggttcttcgtgttgag 142
              | ||| |||||| |||||||
Sbjct: 1228 cacgatgattcttcatgttgag 1249