Miyakogusa Predicted Gene

Lj0g3v0196459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0196459.1 Non Chatacterized Hit- tr|K4C3K7|K4C3K7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=HCR,40,2e-19,LEURICHRPT,NULL; L domain-like,NULL; Leucine-rich
repeat, SDS22-like subfamily,NULL; no description,,CUFF.12433.1
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66357 weakly similar to UniRef100_A7PH72 Cluster: Chr...    64   8e-10

>gnl|LJGI|TC66357 weakly similar to UniRef100_A7PH72 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 1239

 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 17  ttgaaggctccattccttgggagttagggtccctaaaaaa 56
           |||||||||||||||||||||||||||| ||||| |||||
Sbjct: 899 ttgaaggctccattccttgggagttaggttccctcaaaaa 938