Miyakogusa Predicted Gene
- Lj0g3v0196179.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0196179.1 tr|B9MUV9|B9MUV9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_676458 PE=4
SV=1,46.43,1e-18,MYB_LIKE,Myb-like domain; Myb_DNA-bind_4,NULL;
seg,NULL,CUFF.12417.1
(870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77993 similar to UniRef100_A7QAD5 Cluster: Chromosome... 741 0.0
gnl|LJGI|AV425291 weakly similar to UniRef100_Q6EIZ1 Cluster: Ke... 145 5e-34
gnl|LJGI|DC597352 60 2e-08
>gnl|LJGI|TC77993 similar to UniRef100_A7QAD5 Cluster: Chromosome undetermined
scaffold_70, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_70, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 496
Score = 741 bits (374), Expect = 0.0
Identities = 377/378 (99%)
Strand = Plus / Plus
Query: 1 atggcaactcctccacctccagccaccacctccgccgtcaagaaaccccaaccgatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 atggcaactcctccacctccagccaccacctccgccgtcaagaaaccccaaccgatccct 75
Query: 61 tggacccaccaagagacggtgaacctcatccgcgcgtaccaagagaaatggtactccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tggacccaccaagagacggtgaacctcatccgcgcgtaccaagagaaatggtactccctc 135
Query: 121 aaacgcggccctctccgctccaaccagtgggaagaggtcgccgtcgttgtcgccgcgcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 aaacgcggccctctccgctccaaccagtgggaagaggtcgccgtcgttgtcgccgcgcga 195
Query: 181 tgcggctacgacttcgcccacccttctaagtccgccctccagtgccgccataagatcgag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgcggctacgacttcgcccacccttctaagtccgccctccagtgccgccataagatcgac 255
Query: 241 aagctccgccagcgccaccgcgctgagaaacaccgccctgccacccgcccctggcagtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aagctccgccagcgccaccgcgctgagaaacaccgccctgccacccgcccctggcagtat 315
Query: 301 ttctccctcatggatgacctcgagcgtggtccgctccctatctccgctcatcccctcgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttctccctcatggatgacctcgagcgtggtccgctccctatctccgctcatcccctcgcg 375
Query: 361 tctttgccccctggcgtc 378
||||||||||||||||||
Sbjct: 376 tctttgccccctggcgtc 393
Score = 65.9 bits (33), Expect = 4e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 445 agggttaactatatgaaatctaagagtgtgaattata 481
|||||||| ||||||||||||||||||||||||||||
Sbjct: 460 agggttaagtatatgaaatctaagagtgtgaattata 496
>gnl|LJGI|AV425291 weakly similar to UniRef100_Q6EIZ1 Cluster: Keratin, type II
cytoskeletal 2 epidermal; n=1; Canis lupus
familiaris|Rep: Keratin, type II cytoskeletal 2
epidermal - Canis familiaris (Dog), partial (5%)
Length = 209
Score = 145 bits (73), Expect = 5e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 atggcaactcctccacctccagccaccacctccgccgtcaagaaaccccaaccgatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggcaactcctccacctccagccaccacctccgccgtcaagaaaccccaaccgatccct 196
Query: 61 tggacccaccaag 73
|||||||||||||
Sbjct: 197 tggacccaccaag 209
>gnl|LJGI|DC597352
Length = 267
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 841 aaaaggatgaagattactcgcccgatttga 870
||||||||||||||||||||||||||||||
Sbjct: 267 aaaaggatgaagattactcgcccgatttga 238