Miyakogusa Predicted Gene

Lj0g3v0195549.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0195549.1 tr|G7KXB0|G7KXB0_MEDTR Receptor-like-kinase
OS=Medicago truncatula GN=MTR_7g084220 PE=4
SV=1,92.27,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Serine/Threonine protein kinases, catalytic,Ser,CUFF.12366.1
         (628 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81634 similar to UniRef100_Q1ENX0 Cluster: Leucine-ri...   248   4e-65
gnl|LJGI|TC68346 homologue to UniRef100_A7PAA2 Cluster: Chromoso...    52   4e-06

>gnl|LJGI|TC81634 similar to UniRef100_Q1ENX0 Cluster: Leucine-rich repeat-containing
           protein kinase family protein; n=1; Musa acuminata|Rep:
           Leucine-rich repeat-containing protein kinase family
           protein - Musa acuminata (Banana), partial (3%)
          Length = 878

 Score =  248 bits (125), Expect = 4e-65
 Identities = 125/125 (100%)
 Strand = Plus / Plus

                                                                       
Query: 504 atcagggccgaaggaaaagttgctggggcttttaaagcttgcattaacatgcacagcaga 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atcagggccgaaggaaaagttgctggggcttttaaagcttgcattaacatgcacagcaga 60

                                                                       
Query: 564 gactctttctattcggccatcaatgaaacaggttcttgagaaattgaaacaattgaaaaa 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gactctttctattcggccatcaatgaaacaggttcttgagaaattgaaacaattgaaaaa 120

                
Query: 624 ttgaa 628
           |||||
Sbjct: 121 ttgaa 125


>gnl|LJGI|TC68346 homologue to UniRef100_A7PAA2 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 937

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 283 acattcggttatgttgcgcccgaatatgccaccacttgcagggtttctgacaaagcagat 342
           ||||||||||||||||| || ||||| ||||  |||||| | ||||||||||| || |||
Sbjct: 144 acattcggttatgttgctcctgaatacgccatgacttgccgcgtttctgacaaggctgat 203

             
Query: 343 gt 344
           ||
Sbjct: 204 gt 205