Miyakogusa Predicted Gene
- Lj0g3v0194689.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0194689.1 tr|C1E5T5|C1E5T5_MICSR Mitochondrial carrier
family OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,31.76,0.000000001,Mitochondrial carrier,Mitochondrial carrier
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.13191.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74732 homologue to UniRef100_A7R0J1 Cluster: Chromoso... 1663 0.0
gnl|LJGI|AV771638 611 e-174
gnl|LJGI|BW598017 448 e-125
gnl|LJGI|AV776491 similar to UniRef100_A7NUN8 Cluster: Chromosom... 446 e-124
gnl|LJGI|BW598970 similar to UniRef100_Q66PX3 Cluster: Mitochond... 270 1e-71
gnl|LJGI|TC75811 similar to UniRef100_A7NUN8 Cluster: Chromosome... 186 2e-46
gnl|LJGI|TC76598 similar to UniRef100_A7R0J1 Cluster: Chromosome... 143 2e-33
gnl|LJGI|BP062297 weakly similar to UniRef100_Q22AL0 Cluster: Hi... 88 1e-16
gnl|LJGI|TC78386 homologue to UniRef100_A7R0J1 Cluster: Chromoso... 54 2e-06
>gnl|LJGI|TC74732 homologue to UniRef100_A7R0J1 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(90%)
Length = 1625
Score = 1663 bits (839), Expect = 0.0
Identities = 839/839 (100%)
Strand = Plus / Plus
Query: 1 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 335
Query: 61 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 395
Query: 121 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 455
Query: 181 gcggcgcatccacattctcctccgccgccgccgatgccacaaccccgcgtgggccccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gcggcgcatccacattctcctccgccgccgccgatgccacaaccccgcgtgggccccatt 515
Query: 241 tctgttggcgtccgtcttgttcaacaagaaggcctccgcgcactcttctccggcgtctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tctgttggcgtccgtcttgttcaacaagaaggcctccgcgcactcttctccggcgtctcc 575
Query: 301 gccaccgtcctccgtcagatgctgtactccaccacccgcatgggcctctacgacatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gccaccgtcctccgtcagatgctgtactccaccacccgcatgggcctctacgacatcctc 635
Query: 361 aagcagaagtggtccaacggcggaaacatgccgctctcacgcaagatcgaggccggactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aagcagaagtggtccaacggcggaaacatgccgctctcacgcaagatcgaggccggactc 695
Query: 421 atcgccggtggaatcggcgccgctgttggcaaccccgccgacgtcgccatggtgcgaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atcgccggtggaatcggcgccgctgttggcaaccccgccgacgtcgccatggtgcgaatg 755
Query: 481 caggccgacgggaggctcccggcggcgcagcgccggaactactcatctgtagtcgacgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 caggccgacgggaggctcccggcggcgcagcgccggaactactcatctgtagtcgacgcc 815
Query: 541 atcaccaggatggcgaagcaggagggagtcaccagcctctggcgcggttcatcgctgact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atcaccaggatggcgaagcaggagggagtcaccagcctctggcgcggttcatcgctgact 875
Query: 601 gtgaaccgcgcgatgctggtgacggcgtcgcagctggcgtcgtacgaccagttcaaggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gtgaaccgcgcgatgctggtgacggcgtcgcagctggcgtcgtacgaccagttcaaggag 935
Query: 661 atgattctggagaagggtttgatgcgtgacgggcttgggacccacgtgacggcgagtttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 atgattctggagaagggtttgatgcgtgacgggcttgggacccacgtgacggcgagtttc 995
Query: 721 gcggcggggtttgtggcggcggttgcgtcgaacccggttgatgtgattaagacgagggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gcggcggggtttgtggcggcggttgcgtcgaacccggttgatgtgattaagacgagggtg 1055
Query: 781 atgaacatgaaggtggagcctggggcggagccgccgtacgccggcgcgttggactgtgc 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 atgaacatgaaggtggagcctggggcggagccgccgtacgccggcgcgttggactgtgc 1114
Score = 149 bits (75), Expect = 4e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 838 gcagggacccttcaccgtggtgctgttcgtgacattggaacaggtccgcaagatgttcaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 gcagggacccttcaccgtggtgctgttcgtgacattggaacaggtccgcaagatgttcaa 1240
Query: 898 ggattactagattga 912
|||||||||||||||
Sbjct: 1241 ggattactagattga 1255
>gnl|LJGI|AV771638
Length = 549
Score = 611 bits (308), Expect = e-174
Identities = 314/316 (99%)
Strand = Plus / Plus
Query: 1 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 234 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggtagctccacc 293
Query: 61 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 353
Query: 121 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 413
Query: 181 gcggcgcatccacattctcctccgccgccgccgatgccacaaccccgcgtgggccccatt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 414 gcggcgcatccacattctcctccgccgccgccgatgccacaagcccgcgtgggccccatt 473
Query: 241 tctgttggcgtccgtcttgttcaacaagaaggcctccgcgcactcttctccggcgtctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctgttggcgtccgtcttgttcaacaagaaggcctccgcgcactcttctccggcgtctcc 533
Query: 301 gccaccgtcctccgtc 316
||||||||||||||||
Sbjct: 534 gccaccgtcctccgtc 549
>gnl|LJGI|BW598017
Length = 484
Score = 448 bits (226), Expect = e-125
Identities = 235/238 (98%)
Strand = Plus / Plus
Query: 1 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atgggccttaaaagaatcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 306
Query: 61 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 366
Query: 121 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaccggttcaacaactccgacccgctctcgccttccaaaacggttcaaccatccacgtg 426
Query: 181 gcggcgcatccacattctcctccgccgccgccgatgccacaaccccgcgtgggcccca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcggcgcatccacattctcctccgccgccgccgatgccacaaccccgcgtgggcccca 484
>gnl|LJGI|AV776491 similar to UniRef100_A7NUN8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 531
Score = 446 bits (225), Expect = e-124
Identities = 240/244 (98%), Gaps = 2/244 (0%)
Strand = Plus / Minus
Query: 596 tgactgtgaaccgcgcgatgctggtgacggcgtcgcagctggcgtcgtacgaccagttca 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgactgtgaaccgcgcgatgctggtgacggcgtcgcagctggcgtcgtacgaccagttcc 472
Query: 656 aggagatgattctggagaagggtttgatgcgtgacgggcttgggacccacgtgacggcga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aggagatgattctggagaagggtttgatgcgtgacgggcttgggacccacgtgacggcga 412
Query: 716 gtttcgcggcggggtttgtggcggcggttgcgtcgaacccggttgatgtgattaagacga 775
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtttcgcggcggggtttgtgtcggcggttgcgtcgaacccggttgatgtgattaagacga 352
Query: 776 gggtgatgaacatgaaggtggagcctggggcggagccgccgtacgccggcgcgttggact 835
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 351 gggtgatgaacatgaaggtggagcctggggcggagccgccgtacgccg--gcgttggact 294
Query: 836 gtgc 839
||||
Sbjct: 293 gtgc 290
Score = 141 bits (71), Expect = 9e-33
Identities = 74/75 (98%)
Strand = Plus / Minus
Query: 838 gcagggacccttcaccgtggtgctgttcgtgacattggaacaggtccgcaagatgttcaa 897
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gcagggacccttccccgtggtgctgttcgtgacattggaacaggtccgcaagatgttcaa 164
Query: 898 ggattactagattga 912
|||||||||||||||
Sbjct: 163 ggattactagattga 149
>gnl|LJGI|BW598970 similar to UniRef100_Q66PX3 Cluster: Mitochondrial uncoupling
protein 5; n=1; Saccharum officinarum|Rep: Mitochondrial
uncoupling protein 5 - Saccharum officinarum
(Sugarcane), partial (13%)
Length = 426
Score = 270 bits (136), Expect = 1e-71
Identities = 148/152 (97%)
Strand = Plus / Plus
Query: 1 atgggccttaaaggtttcgcagaaggaggcatcgcttccatcatcgccggttgctccacc 60
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 275 atgggccttaaaggtttctcagagggaggcatcgcttccatcatcgccggttgctccacc 334
Query: 61 caccctctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caaactctagatctcatcaaggtccgcatgcagctccagggtgaagccaacgctgcccct 394
Query: 121 aaaccggttcaacaactccgacccgctctcgc 152
||||||||||||||||||||||||||||||||
Sbjct: 395 aaaccggttcaacaactccgacccgctctcgc 426
>gnl|LJGI|TC75811 similar to UniRef100_A7NUN8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 650
Score = 186 bits (94), Expect = 2e-46
Identities = 187/218 (85%)
Strand = Plus / Plus
Query: 580 tggcgcggttcatcgctgactgtgaaccgcgcgatgctggtgacggcgtcgcagctggcg 639
|||||||| ||| ||| || ||||||||||||||| | |||||||| || |||||||||
Sbjct: 27 tggcgcgggtcagggcttacggtgaaccgcgcgatgatcgtgacggcttctcagctggcg 86
Query: 640 tcgtacgaccagttcaaggagatgattctggagaagggtttgatgcgtgacgggcttggg 699
|||||||||||||||||||||| ||| | | ||| || | |||| || || |||||
Sbjct: 87 tcgtacgaccagttcaaggagacaattgttgggaaagggtggatgaacgatggtattggg 146
Query: 700 acccacgtgacggcgagtttcgcggcggggtttgtggcggcggttgcgtcgaacccggtt 759
||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 147 acccacgtggcggcgagctttgcggcggggtttgtggcggcggtggcgtcgaacccggtg 206
Query: 760 gatgtgattaagacgagggtgatgaacatgaaggtgga 797
|||||||| ||||| ||||| |||||||||||||||||
Sbjct: 207 gatgtgatcaagactagggttatgaacatgaaggtgga 244
>gnl|LJGI|TC76598 similar to UniRef100_A7R0J1 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 610
Score = 143 bits (72), Expect = 2e-33
Identities = 201/243 (82%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 283 ctcttctccggcgtctccgccaccgtcctccgtcagatgctgtactccaccacccgcatg 342
|||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||
Sbjct: 322 ctcttctccggcgtctccgccaccgtgctccggcagactctctactccaccacccgcatg 381
Query: 343 ggcctctacgacatcctcaagcagaagtggtccaac------ggcggaaacatgccgctc 396
|| ||||||||| ||||||||||||| ||| | || |||| | ||||||||||
Sbjct: 382 ggtctctacgacgtcctcaagcagaaatggagcgacccggagcgcggcaccatgccgctc 441
Query: 397 tcacgcaagatcgaggccggactcatcgccggtggaatcggcgccgctgttggcaacccc 456
|| |||||||| ||| ||||| |||||||| || ||||||||||| || || ||||||
Sbjct: 442 acaagcaagatcacggcgggacttatcgccggagggatcggcgccgccgtggggaacccc 501
Query: 457 -gccgacgtcgccatggtgcgaatgcaggccgacgggaggctcccggcggcgcagcgccg 515
|| || || || |||||||| |||||||| || ||||| ||||||||||| ||||| ||
Sbjct: 502 ggcggatgttgcgatggtgcgtatgcaggctgatgggagactcccggcggctcagcggcg 561
Query: 516 gaa 518
|||
Sbjct: 562 gaa 564
>gnl|LJGI|BP062297 weakly similar to UniRef100_Q22AL0 Cluster: Histone-like
transcription factor (CBF/NF-Y) and archaeal histone;
n=1; Tetrahymena thermophila SB210|Rep: Histone-like
transcription factor (CBF/NF-Y) and archaeal histone -
Tetrahymena thermophila SB210, partial (8%)
Length = 348
Score = 87.7 bits (44), Expect = 1e-16
Identities = 74/79 (93%), Gaps = 5/79 (6%)
Strand = Plus / Minus
Query: 839 cagggacccttcaccgt--ggtgctgttc-gtgacat-tggaacaggtccgc-aagatgt 893
||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||||
Sbjct: 228 cagggacccttcaccgtnnggtgctgttcngtgacatntggaacaggtccgccaagatgt 169
Query: 894 tcaaggattactagattga 912
|||||||||||||||||||
Sbjct: 168 tcaaggattactagattga 150
>gnl|LJGI|TC78386 homologue to UniRef100_A7R0J1 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 509
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 838 gcagggacccttcaccgtggtgctgttcgtgacattggaacaggtccgcaagatgttcaa 897
||||||||||||| | || ||||| |||||||| ||||||||||| || ||| || | ||
Sbjct: 110 gcagggacccttcccggttgtgcttttcgtgacgttggaacaggttcgtaagttgcttaa 169
Query: 898 ggattactaga 908
||||| |||||
Sbjct: 170 ggatttctaga 180