Miyakogusa Predicted Gene
- Lj0g3v0194129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0194129.1 tr|B9NC71|B9NC71_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_679475 PE=4
SV=1,72.88,0.000000000000002,seg,NULL,CUFF.12273.1
(1350 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57761 similar to UniRef100_A7Q4C2 Cluster: Chromosome... 1524 0.0
gnl|LJGI|TC62426 similar to UniRef100_A7Q4C2 Cluster: Chromosome... 567 e-161
>gnl|LJGI|TC57761 similar to UniRef100_A7Q4C2 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 860
Score = 1524 bits (769), Expect = 0.0
Identities = 772/773 (99%)
Strand = Plus / Plus
Query: 1 atggagggtcatcagaatcagattcagggacaacaagttcaggagaggctgaaccaagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 88 atggagggtcatcagaatcagattcagggacaacaagttctggagaggctgaaccaagca 147
Query: 61 ttgcagcagcaactaaacctggaacaagtgaagacgcgcgctatcggtctcttcaaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ttgcagcagcaactaaacctggaacaagtgaagacgcgcgctatcggtctcttcaaagcc 207
Query: 121 atctctcgtatccttgaagatttcgacgcctacgctcgcaccaacaccacccccaaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 atctctcgtatccttgaagatttcgacgcctacgctcgcaccaacaccacccccaaatgg 267
Query: 181 caagatattctcggtcagtattccatgctcaaccttgagcttttcaacattgttgatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caagatattctcggtcagtattccatgctcaaccttgagcttttcaacattgttgatgaa 327
Query: 241 atcaaaaaggtttccaaggctttccttgtttatcccaagaatgtcaatgcccaaaacgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atcaaaaaggtttccaaggctttccttgtttatcccaagaatgtcaatgcccaaaacgcc 387
Query: 301 acaatactccctgttatgctctcctctaaattactccctgaaattgagatcgatgatgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acaatactccctgttatgctctcctctaaattactccctgaaattgagatcgatgatgcc 447
Query: 361 tctaagcgagatcaattgctccacagcatgcaaaacctcccaatccccactcaaattgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tctaagcgagatcaattgctccacagcatgcaaaacctcccaatccccactcaaattgac 507
Query: 421 aagttgaaggctagaattgatatgattgcagccgcatgtgaaggtgctgagaaagtcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aagttgaaggctagaattgatatgattgcagccgcatgtgaaggtgctgagaaagtcttg 567
Query: 481 gctgacactcgtaaagcctattgctttggaactcgtcaaggcccctcatcaattgcccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gctgacactcgtaaagcctattgctttggaactcgtcaaggcccctcatcaattgcccca 627
Query: 541 acaactcttgataagggtcaggctgccaaaattcaagaaaaagaaaacctactccgctcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 acaactcttgataagggtcaggctgccaaaattcaagaaaaagaaaacctactccgctcc 687
Query: 601 gctgtcaatgttggtgaaggattaaggatacctggagaccagaggcagattactcctgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gctgtcaatgttggtgaaggattaaggatacctggagaccagaggcagattactcctgca 747
Query: 661 cttccaatgcatttggccgatgcacttactgtcaatgaatcatcttttcctgatggatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cttccaatgcatttggccgatgcacttactgtcaatgaatcatcttttcctgatggatct 807
Query: 721 actaatagtgtgtatatcaagaataccccgctgccatctaacaccatggctgc 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 actaatagtgtgtatatcaagaataccccgctgccatctaacaccatggctgc 860
>gnl|LJGI|TC62426 similar to UniRef100_A7Q4C2 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 770
Score = 567 bits (286), Expect = e-161
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 1064 agcaacagttcaggcaatctgcaatgcaaggactgggacagttacatggacaacatcaga 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 agcaacagttcaggcaatctgcaatgcaaggactgggacagttacatggacaacatcaga 72
Query: 1124 tgcaattttctcaacaacttgggcatcagcaatttcagggtaggcagctggcttcagggc 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tgcaattttctcaacaacttgggcatcagcaatttcagggtaggcagctggcttcagggc 132
Query: 1184 atgttcagcacggcattggtcaaagccaactcaatcaaggaaatcagatgactcgtttaa 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgttcagcacggcattggtcaaagccaactcaatcaaggaaatcagatgactcgtttaa 192
Query: 1244 atcagttttctggtcctgccaacagtgcattattcagtgctgctcaaacaacacctaata 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atcagttttctggtcctgccaacagtgcattattcagtgctgctcaaacaacacctaata 252
Query: 1304 cccagatgattccaaatatgtcagccacaataccttcacagtcact 1349
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cccagatgattccaaatatgtcagccacaataccttcacagtcact 298