Miyakogusa Predicted Gene

Lj0g3v0191559.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0191559.1 tr|Q26C76|Q26C76_FLABB Ribosomal RNA large
subunit methyltransferase H OS=Flavobacteria bacterium
(s,42.71,1e-18,SPOUT_MTase,SPOUT methyltransferase, predicted; no
description,NULL; alpha/beta knot,NULL,CUFF.12125.1
         (291 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036753 similar to UniRef100_A7P502 Cluster: Chromosom...   490   e-138
gnl|LJGI|BP035291 similar to UniRef100_A7P502 Cluster: Chromosom...    82   2e-15

>gnl|LJGI|GO036753 similar to UniRef100_A7P502 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 597

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacattataaggtctgatgattgggttgtgatgttggatgaacgtgggcaagacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgaacattataaggtctgatgattgggttgtgatgttggatgaacgtgggcaagacata 410

                                                                       
Query: 61  ggatctgagcaaatggcagagctggtgggtggtgcaagtaatactggtgcttcacgatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggatctgagcaaatggcagagctggtgggtggtgcaagtaatactggtgcttcacgatta 470

                                                                       
Query: 121 tctttctgtattggcggtccttatggtcatggaagaaaaatacgagaacgtgctaacata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tctttctgtattggcggtccttatggtcatggaagaaaaatacgagaacgtgctaacata 530

                                                                       
Query: 181 tctatcaagttatcttcactggttttaaatcatcaaatagcattacttgtgctcatggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tctatcaagttatcttcactggttttaaatcatcaaatagcattacttgtgctcatggag 590

                  
Query: 241 cagcttt 247
           |||||||
Sbjct: 591 cagcttt 597


>gnl|LJGI|BP035291 similar to UniRef100_A7P502 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 521

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                    
Query: 27  ggttgtgatgttggatgaacgtgggcaagacataggatctg 67
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttgtgatgttggatgaacgtgggcaagacataggatctg 521