Miyakogusa Predicted Gene
- Lj0g3v0190909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0190909.1 Non Chatacterized Hit- tr|B6U4G2|B6U4G2_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,46.32,0.00004,seg,NULL; TCP,Transcription factor TCP subgroup;
TCP,Transcription factor, TCP; FAMILY NOT NAMED,NUL,CUFF.12093.1
(991 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcript... 1185 0.0
gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosom... 414 e-115
gnl|LJGI|TC79516 similar to UniRef100_A7QV04 Cluster: Chromosome... 228 5e-59
gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-doma... 127 1e-28
gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromoso... 98 1e-19
gnl|LJGI|AV406330 similar to UniRef100_A7QCJ4 Cluster: Chromosom... 94 2e-18
gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromoso... 72 7e-12
>gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcription factor
PCF3-like; n=1; Oryza sativa Japonica Group|Rep:
Transcription factor PCF3-like - Oryza sativa subsp.
japonica (Rice), partial (49%)
Length = 771
Score = 1185 bits (598), Expect = 0.0
Identities = 601/602 (99%)
Strand = Plus / Plus
Query: 147 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 229
Query: 207 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 289
Query: 267 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 349
Query: 327 ccgcggccgccgtatacggatgccaatcatctgcgccgcccgcgtcttccagctcacgcg 386
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ccgcggccgccgtatacggatgccaatcatctgcgccgcccgcgtcttccagctcacgca 409
Query: 387 cgagctcggccacaagtccgatggccagaccatcgagtggctcctccgtcaagctgagcc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cgagctcggccacaagtccgatggccagaccatcgagtggctcctccgtcaagctgagcc 469
Query: 447 ctccatcatcgccgccaccggcaccggcaccacccccgccagcttctcctccgtctctgt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctccatcatcgccgccaccggcaccggcaccacccccgccagcttctcctccgtctctgt 529
Query: 507 ctcgctccgcggcgcctccaacaactcctcgctctcttctccttcgcttgaccacaaacc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctcgctccgcggcgcctccaacaactcctcgctctcttctccttcgcttgaccacaaacc 589
Query: 567 cttgcttgctcctactcctactccgttcattctcgggaagcgtatacgcaccgacgatga 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttgcttgctcctactcctactccgttcattctcgggaagcgtatacgcaccgacgatga 649
Query: 627 ttcctcccccgccgccaaggatgactctgttggacactcgcttgttggctctgctgctcc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttcctcccccgccgccaaggatgactctgttggacactcgcttgttggctctgctgctcc 709
Query: 687 tgctggtttgtgggctcttcctgctaggcctgattttggacagatatggagctttgctgc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgctggtttgtgggctcttcctgctaggcctgattttggacagatatggagctttgctgc 769
Query: 747 tg 748
||
Sbjct: 770 tg 771
Score = 115 bits (58), Expect = 5e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 atgtgccctcctcctgtctccaccagctcctgccgctcaatcattagacccctgttcc 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 atgtgccctcctcctgtctccaccagctcctgccgctcaatcattagacccctgttcc 75
>gnl|LJGI|GO009362 similar to UniRef100_A7QV04 Cluster: Chromosome undetermined
scaffold_183, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_183,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 750
Score = 414 bits (209), Expect = e-115
Identities = 212/213 (99%)
Strand = Plus / Plus
Query: 147 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aatccctagaaattcacactgtaacaaaccctattctcacttctctctacacctgctaac 142
Query: 207 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tatgtctagctctgacgggaccaccaacgggtcaatgattgacccacagaggaccaacca 202
Query: 267 gcaacagcagttatcagtcaagaaaccgccctccaaggaccgtcacagcaaagtcgacgg 326
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 203 gcaacagcagttatcagtcaagaaaccgccccccaaggaccgtcacagcaaagtcgacgg 262
Query: 327 ccgcggccgccgtatacggatgccaatcatctg 359
|||||||||||||||||||||||||||||||||
Sbjct: 263 ccgcggccgccgtatacggatgccaatcatctg 295
Score = 145 bits (73), Expect = 6e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 919 catctgaatttgctcgcttcgttgtccggtgggcatggaaattctggtcggagagacgat 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 catctgaatttgctcgcttcgttgtccggtgggcatggaaattctggtcggagagacgat 349
Query: 979 gaccatcgttgat 991
|||||||||||||
Sbjct: 350 gaccatcgttgat 362
>gnl|LJGI|TC79516 similar to UniRef100_A7QV04 Cluster: Chromosome undetermined
scaffold_183, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_183,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 1384
Score = 228 bits (115), Expect = 5e-59
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 873 catgggagaagcttcggcggcgagggtggggaattaccttcccgggcatctgaatttgct 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 catgggagaagcttcggcggcgagggtggggaattaccttcccgggcatctgaatttgct 213
Query: 933 cgcttcgttgtccggtgggcatggaaattctggtcggagagacgatgaccatcgttgat 991
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 214 cgcttcgttgtccggtgggcatggaaattttggtcggagagacgatgaccatcgttgat 272
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 720 ttttggacagatatggagctttgctgctgccgccgccgccgcgccggaaatggtggtgca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttggacagatatggagctttgctgctgccgccgccgccgcgccggaaatggtggtgca 60
Query: 780 gccggctgtgtcggtgtctgcttc 803
||||||||||||||||||||||||
Sbjct: 61 gccggctgtgtcggtgtctgcttc 84
>gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-domain protein; n=1;
Antirrhinum majus subsp. majus|Rep: TCP-domain protein -
Antirrhinum majus subsp. majus, partial (30%)
Length = 607
Score = 127 bits (64), Expect = 1e-28
Identities = 139/164 (84%)
Strand = Plus / Plus
Query: 322 gacggccgcggccgccgtatacggatgccaatcatctgcgccgcccgcgtcttccagctc 381
||||||||||||||||| || || ||||| | ||||||| ||| | ||||||||||||
Sbjct: 395 gacggccgcggccgccgcatccgtatgccggccctctgcgctgccagggtcttccagctc 454
Query: 382 acgcgcgagctcggccacaagtccgatggccagaccatcgagtggctcctccgtcaagct 441
|| || |||||||||||||||||||| || | ||||||||||||||||||| || |||
Sbjct: 455 acccgggagctcggccacaagtccgacggtgaaaccatcgagtggctcctccagcaggct 514
Query: 442 gagccctccatcatcgccgccaccggcaccggcaccacccccgc 485
|||||||| | ||||||||||| || |||||||||| ||||||
Sbjct: 515 gagccctcggtaatcgccgccactggaaccggcaccatccccgc 558
>gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 811
Score = 97.6 bits (49), Expect = 1e-19
Identities = 139/169 (82%)
Strand = Plus / Plus
Query: 299 ccaaggaccgtcacagcaaagtcgacggccgcggccgccgtatacggatgccaatcatct 358
|||||||||| |||| ||| || ||||||||||||||||| || || ||||| ||
Sbjct: 338 ccaaggaccgccacaccaaggtggacggccgcggccgccggatccgcatgcctgctgcct 397
Query: 359 gcgccgcccgcgtcttccagctcacgcgcgagctcggccacaagtccgatggccagacca 418
|||||||| | || |||||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct: 398 gcgccgccagggtgttccagctgacgcgtgagctaggacacaagtccgacggtgagacca 457
Query: 419 tcgagtggctcctccgtcaagctgagccctccatcatcgccgccaccgg 467
||||||||||||||| || |||||||| | ||||||||||||||||
Sbjct: 458 tcgagtggctcctccagcaggctgagccagcagtcatcgccgccaccgg 506
>gnl|LJGI|AV406330 similar to UniRef100_A7QCJ4 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 256
Score = 93.7 bits (47), Expect = 2e-18
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 397 cacaagtccgatggccagaccatcgagtggctcctccgtcaagctgagccctccatcatc 456
||||||||||| || ||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 10 cacaagtccgacggagagaccatcgagtggctcctccagcaggccgagccggccatcatc 69
Query: 457 gccgccaccggcaccggcaccacccccgccagcttctcc 495
||||||||||||||||| || | |||||||| |||||||
Sbjct: 70 gccgccaccggcaccgggacaatccccgccaacttctcc 108
>gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 601
Score = 71.9 bits (36), Expect = 7e-12
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 358 tgcgccgcccgcgtcttccagctcacgcgcgagctcggccacaagtccgatggccagacc 417
||||| ||||| ||||||||||||| || ||||||||||||| |||||| ||| | |||
Sbjct: 276 tgcgctgcccggatcttccagctcacccgggagctcggccacaggtccgacggcgaaacc 335
Query: 418 atcgagtggctcctccgtcaagctgagccctccatcatcgccgccaccggcaccgg 473
|| ||||||||| || || ||||| |||||||||||||||||||||||||
Sbjct: 336 atacgctggctcctcgaacacgccgagccagccatcatcgccgccaccggcaccgg 391