Miyakogusa Predicted Gene

Lj0g3v0190769.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0190769.1 Non Chatacterized Hit- tr|F4JHF7|F4JHF7_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At4,51.52,3e-19,UNKNOWN PROTEIN,NULL; GAMMA TUBULIN COMPLEX
PROTEIN,Spc97/Spc98,CUFF.12086.1
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73790 weakly similar to UniRef100_A7QCS3 Cluster: Chr...   799   0.0  

>gnl|LJGI|TC73790 weakly similar to UniRef100_A7QCS3 Cluster: Chromosome undetermined
           scaffold_79, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (57%)
          Length = 950

 Score =  799 bits (403), Expect = 0.0
 Identities = 409/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgaattggataacagtagcgagactagggttgaagatgtggcttggctttgctcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggttgaattggataacagtagcgagactagggttgaagatgtggcttggctttgctcg 283

                                                                       
Query: 61  ctttcggaatcagagattgatatgctcattagcttgaaactgttgatcattcggcgtgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctttcggaatcagagattgatatgctcattagcttgaaactgttgatcattcggcgtgca 343

                                                                       
Query: 121 aaaatgatagactgtaaggaattggctaataagtttgaccttaagatgcttcgagtcatt 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaaatgataggctgtaaggaattggctaataagtttgaccttaagatgcttcgagtcatt 403

                                                                       
Query: 181 gcatttgttttgatggaacatctcaaagcagaggtaaaagattcctcacttattccagat 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gcgtttgttttgatggaacatctcaaagcagaggtaaaagattcctcacttattccagat 463

                                                                       
Query: 241 gtggtgaaatctaccgcgtttttagaggcttgcaacttgttgcaatgtaataatgaggtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtggtgaaatctaccgcgtttttagaggcttgcaacttgttgcaatgtaataatgaggtt 523

                                                                       
Query: 301 gctgcaagtattgacgagctaagtatgaatgttggtgctgatatacaaacatttctgaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gctgcaagtattgacgagctaagtatgaatgttggtgctgatatacaaacatttctgaga 583

                                                              
Query: 361 aggccaccaacttccaaaagaaagaagcagaaagttgttagcagcgagtaa 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aggccaccaacttccaaaagaaagaagcagaaagttgttagcagcgagtaa 634