Miyakogusa Predicted Gene
- Lj0g3v0190569.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0190569.1 tr|I1L9B1|I1L9B1_SOYBN Lysyl-tRNA synthetase
OS=Glycine max PE=3 SV=1,90.93,0,LYSYL-TRNA SYNTHETASE,Lysine-tRNA
ligase, class II; ASPARTYL/LYSYL-TRNA SYNTHETASE,Aminoacyl-tRNA
sy,NODE_37580_length_1517_cov_173.673035.path1.1
(1455 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59429 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA... 1376 0.0
gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tR... 543 e-153
gnl|LJGI|TC59705 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA... 430 e-119
gnl|LJGI|TC60737 homologue to UniRef100_Q6F2U9 Cluster: Lysyl-tR... 176 3e-43
>gnl|LJGI|TC59429 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (35%)
Length = 816
Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Plus
Query: 1 atggaagttccttccgagccaccgccagcaaccgccaccggcgaaaccattagcaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggaagttccttccgagccaccgccagcaaccgccaccggcgaaaccattagcaagaat 182
Query: 61 gcactgaagcgggaactcaagaacaagcagaaggaagaagaacggaaacgcaaggaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcactgaagcgggaactcaagaacaagcagaaggaagaagaacggaaacgcaaggaggag 242
Query: 121 gaaaaagccaaaaaggctgctgaaatgcaaagtgctaaggataacaaatctgcacctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gaaaaagccaaaaaggctgctgaaatgcaaagtgctaaggataacaaatctgcacctgtt 302
Query: 181 gatgaagatgatatggacccaacgcaatactttgagaataggataaagtatcttgcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gatgaagatgatatggacccaacgcaatactttgagaataggataaagtatcttgcaggt 362
Query: 241 cagaaaggagaagggaataacccgtatccgcacaagttctttgtcactatgtctgttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cagaaaggagaagggaataacccgtatccgcacaagttctttgtcactatgtctgttgct 422
Query: 301 gaatacattaaggagtatgaaggtttaagcaatgggcaacaccttgaggacgtctctgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaatacattaaggagtatgaaggtttaagcaatgggcaacaccttgaggacgtctctgtg 482
Query: 361 tctttggctggccgaatcatgcacaagcgcgcatctggtgcaaagcttgtcttttatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tctttggctggccgaatcatgcacaagcgcgcatctggtgcaaagcttgtcttttatgat 542
Query: 421 ctgcacggtggtggtttcaaggttcaggttatggccgatgcaagtaaatcggacttgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctgcacggtggtggtttcaaggttcaggttatggccgatgcaagtaaatcggacttgaat 602
Query: 481 gaagctgagttttccaagttccattctaatgtgaagcgtggtgacattgttggcatcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaagctgagttttccaagttccattctaatgtgaagcgtggtgacattgttggcatcact 662
Query: 541 gggtttccaggcaaaagcaagaagggagagcttagtatattccctaagacttttgtggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gggtttccaggcaaaagcaagaagggagagcttagtatattccctaagacttttgtggta 722
Query: 601 ctgtctcactgtctgcatatgatgccgaggcaaaaatccgcagctgctgctgataatgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ctgtctcactgtctgcatatgatgccgaggcaaaaatccgcagctgctgctgataatgca 782
Query: 661 aatttgaagaaaaatctgtgggtaccaggaaata 694
||||||||||||||||||||||||||||||||||
Sbjct: 783 aatttgaagaaaaatctgtgggtaccaggaaata 816
>gnl|LJGI|TC64537 homologue to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (33%)
Length = 910
Score = 543 bits (274), Expect = e-153
Identities = 301/306 (98%), Gaps = 3/306 (0%)
Strand = Plus / Plus
Query: 1150 gagcttacaaaaggcagctataaaatcaagtatcatgcagatgggattgataaggatcct 1209
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 1 gagcttacaaaaggcagctataaa-tcaagtatcatgcagatgggattgataaggatc-t 58
Query: 1210 attgaaatcgattttactccacctttcagaaggattgacatgattgaagatttagagaag 1269
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 59 attgaaatcgattttactccac-tttcagaaggattgacgtgattgaagatttagagaag 117
Query: 1270 atggcaggcctcaatattcccaaagacttgtcaagtgaggaagctaaccaatatctgagg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggcaggcctcaatattcccaaagacttgtcaagtgaggaagctaaccaatatctgagg 177
Query: 1330 gatgcttgcttgaagcatgagatcaaatgccctcctcccgaaacaactgctcgtttgttg 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gatgcttgcttgaagcatgagatcaaatgccctcctcccgaaacaactgctcgtttgttg 237
Query: 1390 gataaacttgtggggcactttttggaagaaacgtgtgtgaatcctacattcatcataaac 1449
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 238 gataaacttgtggggcactttttgggagaaacgtgtgtgaatcctacattcatcataaac 297
Query: 1450 catcct 1455
||||||
Sbjct: 298 catcct 303
>gnl|LJGI|TC59705 similar to UniRef100_A2Q1N3 Cluster: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II;
n=1; Medicago truncatula|Rep: Lysyl-tRNA synthetase,
class-2; Aminoacyl-transfer RNA synthetase, class II -
Medicago truncatula (Barrel medic), partial (34%)
Length = 775
Score = 430 bits (217), Expect = e-119
Identities = 534/639 (83%), Gaps = 3/639 (0%)
Strand = Plus / Plus
Query: 38 ccggcgaaaccattagcaagaatgcactgaagcgggaactcaagaacaagcagaaggaag 97
||||||||| | | ||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct: 105 ccggcgaaaacctcagcaaaaatgcattgaagcgggaactcaagaacaagcagagagaag 164
Query: 98 aagaacggaaacgcaaggaggaggaaaaagccaaaaaggctgctgaaatgcaaagtgcta 157
| || | || ||||||||||| ||||| |||||||||||||||||| ||||| |||||
Sbjct: 165 aggagagaaagcgcaaggaggaagaaaaggccaaaaaggctgctgaactgcaacgtgctc 224
Query: 158 aggataacaaatctgcacctgttgatgaagatgatatggacccaacgcaatactttgaga 217
| ||||||| |||| ||| ||||| |||||||||||||||||||||||| |||||
Sbjct: 225 aatctaacaaacctgcttctgccgatgacgatgatatggacccaacgcaataccatgaga 284
Query: 218 ataggataaagtatcttgcaggtcagaaaggagaagggaataacccgtatccgcacaagt 277
| ||| | ||||||||||| | || || | ||||||||||||||||| |||||||| |
Sbjct: 285 acaggcttaagtatcttgctgcccacaaggcggaagggaataacccgtacccgcacaaat 344
Query: 278 tctttgtcactatgtctgttgctgaatacattaaggagtatgaaggtttaagcaatgggc 337
|| ||| ||||||| ||| ||||||| | | |||| ||| || ||| |||||
Sbjct: 345 tcgcggtctctatgtccattgagcaatacatcagcaaatatggagggttgagcgatgggg 404
Query: 338 aacaccttgaggacgtctctgtgtctttggctggccgaatcatgcacaagcgcgcatctg 397
| ||| |||| || |||||||||||||||||||||||||| |||||||| || | || |
Sbjct: 405 agcacgttgaagatgtctctgtgtctttggctggccgaattatgcacaaacgtacttcgg 464
Query: 398 gtgcaaagcttgtcttttatgatctgcacggtggtggtttcaaggttcaggttatggccg 457
||||||||||||||||||||||||| || |||||||| ||||||||||||||||||| |
Sbjct: 465 gtgcaaagcttgtcttttatgatcttcatggtggtggcctcaaggttcaggttatggctg 524
Query: 458 atgcaagtaaatcggacttgaatgaagctgagttttccaagttccattctaatgtgaagc 517
||||||||||||| || ||| ||| | |||||||||||| |||||||||||||||||||
Sbjct: 525 atgcaagtaaatctgatttgggtgaggttgagttttccaaattccattctaatgtgaagc 584
Query: 518 gtggtgacattgttggcatcactgggtttccaggcaaaagcaagaagggagagcttagta 577
|||| || |||||||| |||||||| |||||||| ||||| ||||| || ||||||||||
Sbjct: 585 gtggggatattgttggtatcactggatttccagggaaaagtaagaaaggggagcttagta 644
Query: 578 tattccctaagacttttgtggtactgtctcactgtctgcatatgatgccgaggcaaaaat 637
| ||||| ||||||||||| || |||||||| ||| | ||||||||||| ||| ||| |
Sbjct: 645 ttttccccaagacttttgtagtgctgtctcattgtttacatatgatgccaagggcaaagt 704
Query: 638 ---ccgcagctgctgctgataatgcaaatttgaagaaaa 673
| || |||||||||||||||||||||||||||||||
Sbjct: 705 ctgctgctgctgctgctgataatgcaaatttgaagaaaa 743
>gnl|LJGI|TC60737 homologue to UniRef100_Q6F2U9 Cluster: Lysyl-tRNA synthetase; n=2;
Oryza sativa Japonica Group|Rep: Lysyl-tRNA synthetase -
Oryza sativa subsp. japonica (Rice), partial (25%)
Length = 933
Score = 176 bits (89), Expect = 3e-43
Identities = 116/125 (92%)
Strand = Plus / Plus
Query: 1331 atgcttgcttgaagcatgagatcaaatgccctcctcccgaaacaactgctcgtttgttgg 1390
|||||||||||||| |||| |||||||||||||| || |||||||| |||| ||| |||
Sbjct: 3 atgcttgcttgaagtatgacatcaaatgccctccccctgaaacaaccactcgcttgctgg 62
Query: 1391 ataaacttgtggggcactttttggaagaaacgtgtgtgaatcctacattcatcataaacc 1450
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ataaacttgtagggcactttttggaagaaacgtgtgtgaatcctacattcatcataaacc 122
Query: 1451 atcct 1455
|||||
Sbjct: 123 atcct 127