Miyakogusa Predicted Gene

Lj0g3v0190499.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0190499.1 Non Chatacterized Hit- tr|I1N0S6|I1N0S6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.26,0,seg,NULL;
DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box, conserved
site; DEAD,DNA/RNA heli,CUFF.12083.1
         (1827 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596008 similar to UniRef100_Q9ZRZ8 Cluster: DEAD-box ...   801   0.0  
gnl|LJGI|TC69554 similar to UniRef100_A7NST3 Cluster: Chromosome...   605   e-172

>gnl|LJGI|BW596008 similar to UniRef100_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA
           helicase 28; n=1; Arabidopsis thaliana|Rep: DEAD-box
           ATP-dependent RNA helicase 28 - Arabidopsis thaliana
           (Mouse-ear cress), partial (7%)
          Length = 471

 Score =  801 bits (404), Expect = 0.0
 Identities = 420/428 (98%)
 Strand = Plus / Plus

                                                                       
Query: 54  agaagaagagcgcaagggagggtcagaatcagaaaaagagcgcaaggaatcggcacagtc 113
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  agaagaagagcgcaagggagggtcagaatcagaaaaagagcgcaaggaatcggcacagtc 103

                                                                       
Query: 114 tccgtggaacttcgccaagtacacggaatccgtggcggaggaatacgctcgcaggaacac 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tccgtggaacttcgccaagtacacggaatccgtggcggaggaatacgctcgcaggaacac 163

                                                                       
Query: 174 cacctcaatcgaccacaaaatctccaacgcccttctcaaacaccaccgccgtattcctat 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cacctcaatcgaccacaaaatctccaacgcccttctcaaacaccaccgccgtattcctat 223

                                                                       
Query: 234 tcctattcctgactccgaccctgatcatcaagaagattatagaccggaagaagaagaaga 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tcctattcctgactccgaccctgatcatcaagaagattatagaccggaagaagaagaaga 283

                                                                       
Query: 294 tgagggcaatgctgatgctggcgatgacgacaagtcnnnnnnnnctccttctgatggaat 353
           ||||||||||||||||||||||||||||||||||||        ||||||||||||||||
Sbjct: 284 tgagggcaatgctgatgctggcgatgacgacaagtcttttttttctccttctgatggaat 343

                                                                       
Query: 354 ctctttccatgctgattccttcttgcacctcaatttgtcacgccctttactccgggcttg 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctctttccatgctgattccttcttgcacctcaatttgtcacgccctttactccgggcttg 403

                                                                       
Query: 414 tcaggccttgggctatattcatccaacaccaattcaggccgcttgcataccattggcatt 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcaggccttgggctatattcatccaacaccaattcaggccgcttgcataccattggcatt 463

                   
Query: 474 gagtggtc 481
           ||||||||
Sbjct: 464 gagtggtc 471


>gnl|LJGI|TC69554 similar to UniRef100_A7NST3 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (28%)
          Length = 1209

 Score =  605 bits (305), Expect = e-172
 Identities = 392/421 (93%)
 Strand = Plus / Plus

                                                                        
Query: 1407 cacatttgttaccgataatgaccggtcacttttaaaagccattgcaaagagggctggttc 1466
            |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 1    cacatttgttaccgataatgaccggtcacttttaaaaggcattgcaaagagggctggtgc 60

                                                                        
Query: 1467 aaagctgaaaagccgcactgttgcagagcaatctatacacaagtggtctcaaataattga 1526
            ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 61   aaagctgaaaagccgcattgttgcagagcaatctatactaaagtggtctcaaataattga 120

                                                                        
Query: 1527 tcagatggagggccaaattgatgaagtacttcaagaagagagggaagaaatagccctgag 1586
            ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 121  tcaaatggaggaccaaattgctgaagtacttcaagaagagagggaagaaatagccctaag 180

                                                                        
Query: 1587 gaaagctgaaatggaggccgcaaaggctgaaaacatgattgcacatagggaagagatctt 1646
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181  gaaagctgaaatggaggccgcaaaggccgaaaacatgattgcacatagggaagagatctt 240

                                                                        
Query: 1647 ttcccgccccaaaagaacctggtttgtcacagagaaggggaagaggcttgttgctaaagc 1706
            |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 241  ttcccgccccaaaagaacctggtttgtcacagagaaggagaagaagcttgttgctaaagc 300

                                                                        
Query: 1707 agcaaaggattccatggataaggataatagttctcgaaaggaggtccttagtgccgaaca 1766
            ||||||||| |||||||||| ||  || |||||  | ||||||||  |||||||| || |
Sbjct: 301  agcaaaggactccatggatacgggaaagagttccaggaaggaggtaattagtgcccaaga 360

                                                                        
Query: 1767 agccgaagaactcagaatgaaggaaaagaagaagcgagagcgagagaaaaatttacctag 1826
            ||| ||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 361  agctgaagacctcaaaatgaaggaaaagaggaagcgagagcgagagaaaaatttgcctag 420

             
Query: 1827 a 1827
            |
Sbjct: 421  a 421