Miyakogusa Predicted Gene
- Lj0g3v0190239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0190239.1 tr|G7IRH1|G7IRH1_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_2g087710
,83.16,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
Cysteine proteinases,NULL; UCH_2_3,Peptid,CUFF.12090.1
(1710 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63796 similar to UniRef100_Q9C585 Cluster: Ubiquitin ... 1356 0.0
>gnl|LJGI|TC63796 similar to UniRef100_Q9C585 Cluster: Ubiquitin carboxyl-terminal
hydrolase 8; n=2; Arabidopsis thaliana|Rep: Ubiquitin
carboxyl-terminal hydrolase 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (9%)
Length = 756
Score = 1356 bits (684), Expect = 0.0
Identities = 684/684 (100%)
Strand = Plus / Plus
Query: 1 atggactctgcctccgaagattgctccgacaactctcaacgaccggaccctcacaacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atggactctgcctccgaagattgctccgacaactctcaacgaccggaccctcacaacaac 132
Query: 61 aacaacgaccagcaagtctatttcgttcctctcaggtggtggaaggatgctcaggattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aacaacgaccagcaagtctatttcgttcctctcaggtggtggaaggatgctcaggattca 192
Query: 121 atgcctgctgcggatttcgataagacgataggaatcgtgtatgcctctttgccaagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgcctgctgcggatttcgataagacgataggaatcgtgtatgcctctttgccaagttct 252
Query: 181 tcctatgctggtcctatgaagatcatcaataacatcttcaactcagatcttgtcttgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcctatgctggtcctatgaagatcatcaataacatcttcaactcagatcttgtcttgaat 312
Query: 241 tttcggggtgaggacgattcgcagcacattagtgaaaacggcgaagtgggtgtgtctggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttcggggtgaggacgattcgcagcacattagtgaaaacggcgaagtgggtgtgtctggc 372
Query: 301 cgggacttcgcattggtgtctggggatatgtggttgcaggcactcaagtggcatagtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgggacttcgcattggtgtctggggatatgtggttgcaggcactcaagtggcatagtgat 432
Query: 361 tcaaaaaatgcaacaaaggatgacaaaggcttttcagctactgacagtgatatgggagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcaaaaaatgcaacaaaggatgacaaaggcttttcagctactgacagtgatatgggagat 492
Query: 421 gtatatcctttacagctcaggctttctattcagacggaaacaagttcatttgcagtcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtatatcctttacagctcaggctttctattcagacggaaacaagttcatttgcagtcaga 552
Query: 481 ataagcaaaaaggacaatgcaactgagctctttaaaagagcctgcaaaatgttcagtgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ataagcaaaaaggacaatgcaactgagctctttaaaagagcctgcaaaatgttcagtgtg 612
Query: 541 gattcagagatgttacgcatttgggacttttcaggtcagataaccttctattttatgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gattcagagatgttacgcatttgggacttttcaggtcagataaccttctattttatgaat 672
Query: 601 ggagaatatcaagtcccaatagacagtcaaaggcagtctgatcaggagattcttctggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggagaatatcaagtcccaatagacagtcaaaggcagtctgatcaggagattcttctggag 732
Query: 661 ttgcaagtttatgggttgtcagac 684
||||||||||||||||||||||||
Sbjct: 733 ttgcaagtttatgggttgtcagac 756