Miyakogusa Predicted Gene
- Lj0g3v0188989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0188989.1 Non Chatacterized Hit- tr|I1ISY6|I1ISY6_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,40.31,3e-18,POZ
domain,BTB/POZ fold; BTB,BTB/POZ; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Broad-Complex,CUFF.12044.1
(516 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed ... 1009 0.0
gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed ... 543 e-154
gnl|LJGI|TC73952 similar to UniRef100_O82343 Cluster: Expressed ... 357 4e-98
gnl|LJGI|TC62135 similar to UniRef100_O82343 Cluster: Expressed ... 278 3e-74
gnl|LJGI|FS332142 similar to UniRef100_O82343 Cluster: Expressed... 238 3e-62
gnl|LJGI|TC65663 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 200 6e-51
gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 161 5e-39
gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed... 113 1e-24
gnl|LJGI|DC599778 weakly similar to UniRef100_A9S1Y2 Cluster: Pr... 103 1e-21
gnl|LJGI|BW630095 similar to UniRef100_O82343 Cluster: Expressed... 78 6e-14
>gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 792
Score = 1009 bits (509), Expect = 0.0
Identities = 516/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 1 atggagtctgattcttgtgaatccagttttagcttcgctttcaatgatacccgcttttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggagtctgattcttgtgaatccagttttagcttcgctttcaatgatacccgcttttcc 165
Query: 61 gataagcttctccgtatcgagatcatgaatgacccgatcaagagaaggagatgcgaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gataagcttctccgtatcgagatcatgaatgacccgatcaagagaaggagatgcgaaaac 225
Query: 121 ggtgatgaagctgcaaacaacaatgactcaatctggaccatggattactctggcgctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ggtgatgaagctgcaaacaacaatgactcaatctggaccatggattactctggcgctact 285
Query: 181 gttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagccctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagccctttc 345
Query: 241 ttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcaccctcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcaccctcagg 405
Query: 301 attaatgcatctgaagaagctggtctcatggagctactcaaatttatgtatagtaatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 attaatgcatctgaagaagctggtctcatggagctactcaaatttatgtatagtaatacc 465
Query: 361 ttgaatatttctgccacacctgctttgctggatgtgcttatggcggctgataaatttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgaatatttctgccacacctgctttgctggatgtgcttatggcggctgataaatttgat 525
Query: 421 gtgccttcatgcatgaaatacttgctaaatccgccca-tgacacttgactctgcattact 479
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 526 gtgccttcatgcatgaaatacttgctaaatccgcccattgacacttgactctgcattact 585
Query: 480 ctacctggagcttccttatactgttgttgcagcccaa 516
|||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctacctggagcttccttatactgttgttgcagcccaa 622
>gnl|LJGI|TC78370 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 1014
Score = 543 bits (274), Expect = e-154
Identities = 337/358 (94%)
Strand = Plus / Plus
Query: 159 catggattactctggcgctactgttgttagagttaaaacactgcatatcagttctcttat 218
||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct: 241 catggatggctctgccgctacagttgttagagttaaaacactgcatataagttctcctat 300
Query: 219 cctggctgctaaaagccctttcttctacaagcttttctcaaatgggatgagtgagtcaga 278
|||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 301 cctggctgctaaaagccctttcttctaccagcttttctcaaatgtgacgagtgagtcaga 360
Query: 279 gcagagacagatcaccctcaggattaatgcatctgaagaagctggtctcatggagctact 338
||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 361 gcagagacatatcaccctcagtattaatgcatctgaagaaactggtctcatggagctact 420
Query: 339 caaatttatgtatagtaataccttgaatatttctgccacacctgctttgctggatgtgct 398
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 421 caaatttatgtatagtaataccttgaatatttctgcggcacctgctttactggatgtgct 480
Query: 399 tatggcggctgataaatttgatgtgccttcatgcatgaaatacttgctaaatccgcccat 458
|||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 tatggctgcggataaatttgatgtgccttcatgcatgaaatacttgctaaattcgcccat 540
Query: 459 gacacttgactctgcattactctacctggagcttccttatactgttgttgcagcccaa 516
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 gacaactgactctgcattactctacctggagcttcctcatactgttgttgcagcccaa 598
>gnl|LJGI|TC73952 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (19%)
Length = 816
Score = 357 bits (180), Expect = 4e-98
Identities = 297/336 (88%)
Strand = Plus / Plus
Query: 175 gctactgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagc 234
||||| |||||| ||||| ||||||||||||||||||||||||| ||||| ||| |||||
Sbjct: 397 gctacagttgttcgagttgaaacactgcatatcagttctcttatactggcagctcaaagc 456
Query: 235 cctttcttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcacc 294
|||||||| ||||| ||||||||||| ||||| ||| || |||||||||| ||| ||
Sbjct: 457 cctttctttcttaagctattctcaaatggtatgagcgagacaaagcagagacatatctcc 516
Query: 295 ctcaggattaatgcatctgaagaagctggtctcatggagctactcaaatttatgtatagt 354
||| ||||| ||||||||||||||| |||||||||||||||||| |||||| |||| |||
Sbjct: 517 ctccggatttatgcatctgaagaagatggtctcatggagctactgaaatttttgtacagt 576
Query: 355 aataccttgaatatttctgccacacctgctttgctggatgtgcttatggcggctgataaa 414
||||| ||||||||| | || ||||||||||||||||||| ||||||||||||||||||
Sbjct: 577 aatactttgaatattacggcagcacctgctttgctggatgtacttatggcggctgataaa 636
Query: 415 tttgatgtgccttcatgcatgaaatacttgctaaatccgcccatgacacttgactctgca 474
|||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 637 tttgatgtgccttcatgcatgagatacttgctaaatttgcccatgacaccggactctgca 696
Query: 475 ttactctacctggagcttccttatactgttgttgca 510
| ||||||| ||||||||||| |||| |||| ||||
Sbjct: 697 tcactctacttggagcttcctcataccgttgatgca 732
>gnl|LJGI|TC62135 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 809
Score = 278 bits (140), Expect = 3e-74
Identities = 272/316 (86%)
Strand = Plus / Plus
Query: 121 ggtgatgaagctgcaaacaacaatgactcaatctggaccatggattactctggcgctact 180
||||||||||||||||||| |||||| |||| | ||| || |||| |||| |||||
Sbjct: 433 ggtgatgaagctgcaaacatcaatgattcaaacaggagcaaagattgctctccagctaca 492
Query: 181 gttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagccctttc 240
||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||
Sbjct: 493 gttgtcagagttaaaacactgcatataagttctcctatcctggcttctaaaagccctttc 552
Query: 241 ttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcaccctcagg 300
||||| ||||||||||| ||||||||||| |||||| || ||||||| |||||||||||
Sbjct: 553 ttctataagcttttctcgaatgggatgagggagtcaaaggagagacatgtcaccctcagg 612
Query: 301 attaatgcatctgaagaagctggtctcatggagctactcaaatttatgtatagtaatacc 360
|||||||| |||||||||| || ||| ||||| || || || |||||||| |||||||||
Sbjct: 613 attaatgcttctgaagaagatgctctaatggacctgctgaattttatgtacagtaatacc 672
Query: 361 ttgaatatttctgccacacctgctttgctggatgtgcttatggcggctgataaatttgat 420
||||| | |||| || | ||||||||||||||||||||||| ||||||||||||||
Sbjct: 673 ttgaaggctactgcaccatcagctttgctggatgtgcttatggctgctgataaatttgaa 732
Query: 421 gtgccttcatgcatga 436
|| ||||||||||||
Sbjct: 733 gttgcttcatgcatga 748
>gnl|LJGI|FS332142 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (22%)
Length = 784
Score = 238 bits (120), Expect = 3e-62
Identities = 174/192 (90%)
Strand = Plus / Plus
Query: 313 gaagaagctggtctcatggagctactcaaatttatgtatagtaataccttgaatatttct 372
|||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct: 567 gaagaagctggtctcatggagctactcaaatttatgtacaggaatactttgaatatcacg 626
Query: 373 gccacacctgctttgctggatgtgcttatggcggctgataaatttgatgtgccttcatgc 432
|| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 627 gcagcacctgctttgctggatgtacttatggttgctgataaatttgatgtgccttcatgc 686
Query: 433 atgaaatacttgctaaatccgcccatgacacttgactctgcattactctacctggagctt 492
|||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||
Sbjct: 687 atgagatacttgctaaatttgcccatgacacctgactctgcatcactctacctggaactt 746
Query: 493 ccttatactgtt 504
||| ||||||||
Sbjct: 747 cctcatactgtt 758
Score = 131 bits (66), Expect = 5e-30
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 176 ctactgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagcc 235
||||||||||| ||||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 362 ctactgttgttcgagttaaaacactgcatatcagttctcctatactggctgctcaaagcc 421
Query: 236 ctttcttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcaccc 295
||||||| | ||||||||||| ||||||||||| || || ||||| |||| || | |
Sbjct: 422 ctttcttttttaagcttttctctaatgggatgagcgaaacaaagcagggacatgtctctc 481
Query: 296 tcaggattaatgcatctg 313
|||||||| |||||||||
Sbjct: 482 tcaggatttatgcatctg 499
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 15 ttgtgaatccagttttagcttcgctttcaatgata 49
||||||||||| |||||||||||||||||||||||
Sbjct: 141 ttgtgaatccaattttagcttcgctttcaatgata 175
>gnl|LJGI|TC65663 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1196
Score = 200 bits (101), Expect = 6e-51
Identities = 206/241 (85%)
Strand = Plus / Plus
Query: 202 catatcagttctcttatcctggctgctaaaagccctttcttctacaagcttttctcaaat 261
||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 570 catattagttctcctatcttggctgctaaaagtcctttcttctacaagcttttctcaaat 629
Query: 262 gggatgagtgagtcagagcagagacagatcaccctcaggattaatgcatctgaagaagct 321
|||||||| |||||||||||||| || ||||||| || |||| ||||||||| ||||||
Sbjct: 630 gggatgagggagtcagagcagaggcatgtcaccctgagaattactgcatctgaggaagct 689
Query: 322 ggtctcatggagctactcaaatttatgtatagtaataccttgaatatttctgccacacct 381
| |||||||||||| || || |||||||||||||||| ||| | ||| || | |||||
Sbjct: 690 gctctcatggagcttctgaactttatgtatagtaatagcttaagcattacttcaccacct 749
Query: 382 gctttgctggatgtgcttatggcggctgataaatttgatgtgccttcatgcatgaaatac 441
| ||| |||||||| | ||||| ||||| |||||||| || |||||||||||| ||||
Sbjct: 750 ggtttattggatgtgttgatggctgctgacaaatttgaagttgcttcatgcatgagatac 809
Query: 442 t 442
|
Sbjct: 810 t 810
>gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1623
Score = 161 bits (81), Expect = 5e-39
Identities = 165/193 (85%)
Strand = Plus / Plus
Query: 174 cgctactgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaag 233
|||||| |||| ||||||| |||||||| ||||| |||| ||| |||||| |||||||
Sbjct: 264 cgctacagttgccagagttagaacactgcgtatcaaatctcgtatgctggctactaaaag 323
Query: 234 ccctttcttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcac 293
|||||||||||| ||||||||||||||||||| || || ||||||| || ||| ||||
Sbjct: 324 ccctttcttctataagcttttctcaaatgggacgactggatcagagctgaaacatgtcac 383
Query: 294 cctcaggattaatgcatctgaagaagctggtctcatggagctactcaaatttatgtatag 353
||||||||||||||||||||||||||||| ||||||| ||||| | | |||||||| ||
Sbjct: 384 cctcaggattaatgcatctgaagaagctgttctcatgaagctattgagatttatgtgcag 443
Query: 354 taataccttgaat 366
||| ||||||||
Sbjct: 444 caatcccttgaat 456
>gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 495
Score = 113 bits (57), Expect = 1e-24
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 180 tgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagcccttt 239
|||||| || ||||||| |||||||||| |||||||||| |||||||||| ||| ||||
Sbjct: 348 tgttgtcagtgttaaaatcctgcatatcaattctcttatcttggctgctaagagcacttt 407
Query: 240 cttctacaagcttttctcaaatgggatgagtgagtcagagcagagacagatcaccct 296
|||| | ||||||||||| ||||||||||| ||||||||| ||||||| |||||||
Sbjct: 408 cttccataagcttttctccaatgggatgagggagtcagaggagagacatgtcaccct 464
>gnl|LJGI|DC599778 weakly similar to UniRef100_A9S1Y2 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(12%)
Length = 575
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 278 agcagagacagatcaccctcaggattaatgcatctgaagaagctggtctcatggagctac 337
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 agcagagacactacaccctcaggattaatgcatctgaagaagctgttctcatggagctac 327
Query: 338 tcaaatttatgt 349
| ||||||||||
Sbjct: 328 taaaatttatgt 339
Score = 67.9 bits (34), Expect = 6e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 454 cccatgacacttgactctgcattactctacctggagcttccttatactgt 503
|||||||||||||||||||||||| | ||||| ||||||||| |||||||
Sbjct: 435 cccatgacacttgactctgcattattttacctcgagcttcctcatactgt 484
>gnl|LJGI|BW630095 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 485
Score = 77.8 bits (39), Expect = 6e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 178 actgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagccct 237
||||||||||| |||||||| |||||||||| |||||||||| | ||||| |||||| ||
Sbjct: 407 actgttgttagggttaaaaccctgcatatcaattctcttatcttagctgccaaaagcact 466
Query: 238 ttcttctacaagcttttct 256
|||||| ||||||||||
Sbjct: 467 ttcttccttaagcttttct 485