Miyakogusa Predicted Gene
- Lj0g3v0188239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0188239.1 Non Chatacterized Hit- tr|D3BB10|D3BB10_POLPA
Putative uncharacterized protein OS=Polysphondylium pa,39.75,6e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL; CARBON CATABOLITE
REPRESSOR PROTEIN 4,NULL; DNase I-l,CUFF.12021.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64191 similar to UniRef100_A7QET7 Cluster: Chromosome... 1279 0.0
gnl|LJGI|BP055634 101 5e-21
>gnl|LJGI|TC64191 similar to UniRef100_A7QET7 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 986
Score = 1279 bits (645), Expect = 0.0
Identities = 645/645 (100%)
Strand = Plus / Plus
Query: 1 atggttgtagctgcaggttctaagctgagaagagggaactgttcttctcatagtgttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 atggttgtagctgcaggttctaagctgagaagagggaactgttcttctcatagtgttgtt 253
Query: 61 atcaatgattataataacagtgatggtgaaatttctagagttaagaagagtgggagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcaatgattataataacagtgatggtgaaatttctagagttaagaagagtgggagtttt 313
Query: 121 tcagcactgggagaggtgaatagagaccattcatgtgtttcatttaccactttcaacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcagcactgggagaggtgaatagagaccattcatgtgtttcatttaccactttcaacatc 373
Query: 181 ctagctcctatttacaaacggattgatccacagaaccagggcctccgagagagtgacacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctagctcctatttacaaacggattgatccacagaaccagggcctccgagagagtgacacg 433
Query: 241 agatcattctggttggccaggaaccagaggattctagatggcttgcttgctgaatcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agatcattctggttggccaggaaccagaggattctagatggcttgcttgctgaatcatct 493
Query: 301 tccattatgtgccttcaggaattttgggtcggaaatgaagaacttgttcacatgtatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tccattatgtgccttcaggaattttgggtcggaaatgaagaacttgttcacatgtatgag 553
Query: 361 gagagacttggaaatgctggctaccatctcttcaagctcgcccgaaccaacaaccgtgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gagagacttggaaatgctggctaccatctcttcaagctcgcccgaaccaacaaccgtgga 613
Query: 421 gatggtcttctgactgctatacacaaagaatatttgagtgttgtaaactatcgggagttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gatggtcttctgactgctatacacaaagaatatttgagtgttgtaaactatcgggagttg 673
Query: 481 ctttttaatgatttcggtgatcgtgtcgcacagttgttacatgttcaatcggctgctccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctttttaatgatttcggtgatcgtgtcgcacagttgttacatgttcaatcggctgctccg 733
Query: 541 ttattaccaaaccaaaagggcagtcttcaccaagagtttctgattgtgaacacccacttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttattaccaaaccaaaagggcagtcttcaccaagagtttctgattgtgaacacccacttg 793
Query: 601 ttatttcctcatgattcgagcctgtctatagttagattgcagcag 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ttatttcctcatgattcgagcctgtctatagttagattgcagcag 838
>gnl|LJGI|BP055634
Length = 546
Score = 101 bits (51), Expect = 5e-21
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 232 agtgacacgagatcattctggttggccaggaaccagaggattctagatggcttgcttgct 291
||||||| |||||||||||||||||||| |||| |||| || ||||| |||||||||||
Sbjct: 249 agtgacatgagatcattctggttggccaagaacaagagcgttttagattgcttgcttgct 308
Query: 292 gaatcatcttccattatgtgcct 314
||||||||||||||| |||||||
Sbjct: 309 gaatcatcttccattgtgtgcct 331