Miyakogusa Predicted Gene

Lj0g3v0187809.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0187809.1 Non Chatacterized Hit- tr|J3N3S1|J3N3S1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB10G2,45.92,1e-17,2OG-FeII_Oxy_3,Oxoglutarate/iron-dependent
dioxygenase; PROLYL 4-HYDROXYLASE ALPHA-1 SUBUNIT-RELATED,CUFF.11950.1
         (324 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57562 similar to UniRef100_Q75ZI4 Cluster: Prolyl 4-h...   565   e-161
gnl|LJGI|TC76330 similar to UniRef100_A7PLM6 Cluster: Chromosome...    76   1e-13

>gnl|LJGI|TC57562 similar to UniRef100_Q75ZI4 Cluster: Prolyl 4-hydroxylase; n=1;
           Nicotiana tabacum|Rep: Prolyl 4-hydroxylase - Nicotiana
           tabacum (Common tobacco), partial (86%)
          Length = 1111

 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggcatttaatgtcctccgctataaggtcgggcagaaatacagttctcattatgatgcact 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggcatttaatgtcctccgctataaggtcgggcagaaatacagttctcattatgatgcact 662

                                                                       
Query: 63  ccatcctgatatatatggtccacaaaagagccaaaggatggcttcatttttgctgtattt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccatcctgatatatatggtccacaaaagagccaaaggatggcttcatttttgctgtattt 722

                                                                       
Query: 123 atctgatgttccggaaggtggggagaccatgtttccatttgagaatggattgaatatgga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 atctgatgttccggaaggtggggagaccatgtttccatttgagaatggattgaatatgga 782

                                                                       
Query: 183 cggtagctattattatgagaaatgtattggtctaaaagtaaagccacgcaagggggatgg 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cggtagctattattatgagaaatgtattggtctaaaagtaaagccacgcaagggggatgg 842

                                                        
Query: 243 acttctattttattcattgttccctaatggtacaattgatccgat 287
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 acttctattttattcattgttccctaatggtacaattgatccgat 887


>gnl|LJGI|TC76330 similar to UniRef100_A7PLM6 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 445

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 233 agggggatggacttctattttattcattgttccctaatggtacaattgatccga 286
           |||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 74  agggtgatggacttctattttattccttgttccctaatggtaccattgacccga 127