Miyakogusa Predicted Gene
- Lj0g3v0187709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0187709.1 Non Chatacterized Hit- tr|B7FHT8|B7FHT8_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,27.27,1e-18,seg,NULL; B3,B3 DNA binding domain; no
description,DNA-binding pseudobarrel domain; B3 DNA binding
d,CUFF.11941.1
(1503 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome... 656 0.0
gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Tr... 611 e-174
gnl|LJGI|TC79583 similar to UniRef100_A7P9A4 Cluster: Chromosome... 446 e-124
gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Tra... 258 9e-68
gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Pre... 123 3e-27
>gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 480
Score = 656 bits (331), Expect = 0.0
Identities = 354/359 (98%), Gaps = 2/359 (0%)
Strand = Plus / Plus
Query: 1146 ggatgaagctaacaaatttacttcagaaaatccctgcttcaaagtcacaatacaacctga 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggatgaagctaacaaatttacttcagaaaatccctgcttcaaagtcacaatacaacctga 61
Query: 1206 tcgtgcggggaattattacagaccgcacgtaactcttaccttcatgaaaaagtacttaaa 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcgtgcggggaattattacagaccgcacgtaactcttaccttcatgaaaaagtacttaaa 121
Query: 1266 taaaaagaagaatgtgatgttacagtttgggaacaatttgtggcctgtgaagttgctcca 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taaaaagaagaatgtgatgttacagtttgggaacaatttgtggcctgtgaagttgctcca 181
Query: 1326 t-tcagcctcatatggagccaagttgtccaaaggttgggccctatttgcaggagaaagta 1384
| | || || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tatgaggctga-atggagccaagttgtccaaaggttgggccctatttgcaggagaaagta 240
Query: 1385 aattggtagctggagatgtttgtgtctttgagctcatcaacaaagaagatgctgtgtttg 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattggtagctggagatgtttgtgtctttgagctcatcaacaaagaagatgctgtgtttg 300
Query: 1445 atgttcatattttcaaaggtcactgttcatattttactcatgtgaaatgcaatgagtaa 1503
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgttcatattttcaaaggtcactgttcatattttactcatgtgaaatgcaatgagtaa 359
>gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (20%)
Length = 409
Score = 611 bits (308), Expect = e-174
Identities = 308/308 (100%)
Strand = Plus / Plus
Query: 1 atgactcgcaacaagaactctgcaatctgtttctttaagatcatcacaacaacatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgactcgcaacaagaactctgcaatctgtttctttaagatcatcacaacaacatgcatt 161
Query: 61 gaagctggaaaacttaagctcccaaatggtttcattaagaaatacagtggtgatatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gaagctggaaaacttaagctcccaaatggtttcattaagaaatacagtggtgatatgcca 221
Query: 121 aacccagtaattctcaagccccctgataacactagttgggagatacattggagtaaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aacccagtaattctcaagccccctgataacactagttgggagatacattggagtaaacat 281
Query: 181 gattctgatatttggtttcaaaagggttgggaagaatttgcgaaatattactccctctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gattctgatatttggtttcaaaagggttgggaagaatttgcgaaatattactccctctac 341
Query: 241 catgggcacttggttttgtttgaattcaaggatgcttctcattttggggtgcatatattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 catgggcacttggttttgtttgaattcaaggatgcttctcattttggggtgcatatattt 401
Query: 301 gacaagag 308
||||||||
Sbjct: 402 gacaagag 409
>gnl|LJGI|TC79583 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 516
Score = 446 bits (225), Expect = e-124
Identities = 267/277 (96%), Gaps = 3/277 (1%)
Strand = Plus / Plus
Query: 1230 gcacgtaactcttaccttcatgaaaaagtacttaaataaaaagaagaatgtgatgttaca 1289
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 130 gcacgtaactcttaccttcatgtataagtacttaaataaaaagaagaatgtgatgttaca 189
Query: 1290 gtttg-ggaacaatttgtggcctgtgaagttgctccattcagcctcatatggagccaagt 1348
||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gtttgcggtaccatttgtggcctgtgaagttgctccattcagcctcatatggagccaagt 249
Query: 1349 tgtccaaaggttgggccctatttgc-aggagaaagtaaattggtagc-tggagatgtttg 1406
||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 250 tgtcctaaggttgggccctatttgccaggagaaagtaaattggtagcctggagatgtttg 309
Query: 1407 tgtctttgagctcatcaacaaagaagatgctgtgtttgatgttcatattttcaaaggtca 1466
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgtctttgagctcatccaccaagaagatgctgtgtttgatgttcatattttcaaaggtca 369
Query: 1467 ctgttcatattttactcatgtgaaatgcaatgagtaa 1503
|||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgttcatattttactcatgtgaaatgcaatgagtaa 406
>gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (24%)
Length = 744
Score = 258 bits (130), Expect = 9e-68
Identities = 295/347 (85%), Gaps = 6/347 (1%)
Strand = Plus / Plus
Query: 191 tttggtttcaaaagggttgggaagaatttgcgaaatattactccctctaccatgggcact 250
||||||||||||| |||||| |||| ||||||||||||||||||||| | || || |||
Sbjct: 275 tttggtttcaaaatggttggaaagattttgcgaaatattactccctcgatcacggacaca 334
Query: 251 tggttttgtttgaattcaaggatgcttctcattttggggtgcatatatttgacaagagca 310
|||| |||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 335 tggtgttgtttgaatacaaggattcttctcattttggggtacatatatttgataagagca 394
Query: 311 cccttgaaatagaatatcctatgatctatgacaatcaagatgaagagaacaacaaccctg 370
||||||||||| ||||||| | | |||| ||||||||||||||| |||||||||
Sbjct: 395 cccttgaaataagatatcct-tca--catgagaatcaagatgaagag---cacaaccctg 448
Query: 371 atcagatgagtgacaactcagttgagattttgtatgagataccttcttggaagaagacta 430
||||||| ||| |||| |||||||| ||| || |||||||| |||| ||||||||||
Sbjct: 449 atcagattgatgatgactctgttgagatattggataagatacctccttgcaagaagacta 508
Query: 431 aactgaaatcacccattgcatgtcctcaaccaagtaagaaattgagaaccaggacaagca 490
||||||||||||| || | |||||| ||||| | ||||||||||||||||| |||||
Sbjct: 509 aactgaaatcaccaatgtcgtgtcctaaaccacgcaagaaattgagaaccagtacaagtg 568
Query: 491 aagatgttggaagaagccctaaattgcaaaacttgtctaaacaagtc 537
||||||||||| ||| ||| ||||||| |||||| |||||||||||
Sbjct: 569 aagatgttggagaaaggcctgaattgcacaacttgcctaaacaagtc 615
Score = 75.8 bits (38), Expect = 7e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 634 actgaatgtcttaaaagggatcccttaacttctaaaaccactaaagctttgaaccaagcc 693
|||||||| ||| ||||||| ||||||||| |||| |||| ||||||||||| ||||
Sbjct: 643 actgaatgccttgaaagggaggacttaacttccaaaatcactgaagctttgaacagagcc 702
Query: 694 agaaccttcaaatctaaaaatccgtccttcgtgagtgtcatg 735
||||| ||| ||||||||| ||| |||||| ||| |||||||
Sbjct: 703 agaactttccaatctaaaattccctccttcatgactgtcatg 744
>gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(17%)
Length = 516
Score = 123 bits (62), Expect = 3e-27
Identities = 110/126 (87%)
Strand = Plus / Plus
Query: 1344 caagttgtccaaaggttgggccctatttgcaggagaaagtaaattggtagctggagatgt 1403
|||||||||| ||||||||| | |||||| ||| ||||||||||||||| ||||||||
Sbjct: 215 caagttgtcccaaggttgggtcgaatttgctggaaaaagtaaattggtagttggagatgc 274
Query: 1404 ttgtgtctttgagctcatcaacaaagaagatgctgtgtttgatgttcatattttcaaagg 1463
|||||| |||||||||||||| || |||||| | ||| |||||||||| ||||||| |||
Sbjct: 275 ttgtgtgtttgagctcatcaataaggaagatccggtgcttgatgttcacattttcagagg 334
Query: 1464 tcactg 1469
||||||
Sbjct: 335 tcactg 340