Miyakogusa Predicted Gene

Lj0g3v0187539.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0187539.1 Non Chatacterized Hit- tr|D8QRI3|D8QRI3_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,54.32,5e-19,AUTOPHAGY PROTEIN 12,Autophagy-related protein
12; Ubiquitin-like,NULL; APG12,Autophagy-related prot,CUFF.11935.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62867 similar to UniRef100_A9SPY8 Cluster: Predicted ...   557   e-158

>gnl|LJGI|TC62867 similar to UniRef100_A9SPY8 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (87%)
          Length = 944

 Score =  557 bits (281), Expect = e-158
 Identities = 284/285 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcggttgaatcgccaagctctgttcgtaaagtggttgttcatctgagagctaccggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgtcggttgaatcgccaagctctgttcgtaaagtggttgttcatctgagagctaccggt 160

                                                                       
Query: 61  gatgctccgattctcaagcaatccaaattcaagatagctggaactgataagtttgccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gatgctccgattctcaagcaatccaaattcaagatagctggaactgataagtttgccaaa 220

                                                                       
Query: 121 gtgatagactttcttcgccgacagctccatagggacacattgtttgtatacgtcaatagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtgatagactttcttcgccgacagctccatagggacacattgtttgtatacgtcaatagt 280

                                                                       
Query: 181 gctttttcaccaaatcctgatgaattgatcattgatttgtataataattttggttttgat 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gcttttccaccaaatcctgatgaattgatcattgatttgtataataattttggttttgat 340

                                                        
Query: 241 ggcaaactgatagtcaactacgcttgttccatggcatggggctaa 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggcaaactgatagtcaactacgcttgttccatggcatggggctaa 385