Miyakogusa Predicted Gene
- Lj0g3v0187299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0187299.1 tr|F4JFQ3|F4JFQ3_ARATH Methyl-CpG-binding domain
protein 4 OS=Arabidopsis thaliana GN=At3g07930
PE=4,33.18,4e-18,seg,NULL; 5-METHYLCYTOSINE G/T MISMATCH-SPECIFIC DNA
GLYCOSYLASE,NULL,CUFF.11921.1
(844 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome... 1405 0.0
>gnl|LJGI|TC58046 similar to UniRef100_A7R238 Cluster: Chromosome undetermined
scaffold_397, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_397,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (33%)
Length = 1465
Score = 1405 bits (709), Expect = 0.0
Identities = 715/717 (99%)
Strand = Plus / Plus
Query: 1 atgagagttgtgcagctaggaacacgaaacgtttctccttattttctaaaagaccatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgagagttgtgcagctaggaacacgaaacgtttctccttattttctaaaagaccatgaa 180
Query: 61 aagaagttactagaaaacgcttccaaacaaaaggtcagaaggaaagttaggtatcgtgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 aagaagttactagaaaacgcttccaaacaaaaggtcagaaggaaagttaggtctcgtgtg 240
Query: 121 gtgtccccttattttcagaatcaccacatggaattggaagccgtggccgaaaccagtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgtccccttattttcagaatcaccacatggaattggaagccgtggccgaaaccagtaat 300
Query: 181 ttcaaagctagaaattactttccgaataagcaagaggatgagaggaatgtttctccctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaaagctagaaattactttccgaataagcaagaggatgagaggaatgtttctccctat 360
Query: 241 tttcaaaaatcagttatcacagaagaagaggtaaatgaggcagaaacgtctaatcttaaa 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 tttcaaaaatcagttatcacagaagaagagggaaatgaggcagaaacgtctaatcttaaa 420
Query: 301 gtcagaaaggtttcctgttattttggagaagctccaaagatttctccttgttgtttccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcagaaaggtttcctgttattttggagaagctccaaagatttctccttgttgtttccaa 480
Query: 361 aatgaaattgggaaaatgtcagtagaatcagcagagaatggttatggcaatggggttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgaaattgggaaaatgtcagtagaatcagcagagaatggttatggcaatggggttgaa 540
Query: 421 attagtaaacctggaattagaagtgtgaataataacttcaaaaacgaggctgaaacttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attagtaaacctggaattagaagtgtgaataataacttcaaaaacgaggctgaaacttgt 600
Query: 481 aatcttcaaggtagaaaggtctcctctaagcacattggaaaagccaaggataagcgaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatcttcaaggtagaaaggtctcctctaagcacattggaaaagccaaggataagcgaaaa 660
Query: 541 aatacaactctttcagcttctcagaagtgggacgaagcttatagaaaaagaactccggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aatacaactctttcagcttctcagaagtgggacgaagcttatagaaaaagaactccggat 720
Query: 601 aatacatgggtgccaccgcggtctcatttacatcttattcaggaggatcatattcgcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatacatgggtgccaccgcggtctcatttacatcttattcaggaggatcatattcgcgac 780
Query: 661 ccttggagagtgttggtgatatgcatgctactcaacatcactactggtcgacaggta 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccttggagagtgttggtgatatgcatgctactcaacatcactactggtcgacaggta 837