Miyakogusa Predicted Gene
- Lj0g3v0186819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0186819.1 tr|G6XTK8|G6XTK8_RHIRD Dual-specificity RNA
methyltransferase RlmN OS=Agrobacterium tumefaciens CCNW,26.87,5.6,
,CUFF.11870.1
(397 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036647 347 3e-95
gnl|LJGI|TC68370 similar to UniRef100_Q6MYW6 Cluster: Basic prol... 168 2e-41
gnl|LJGI|BW605523 weakly similar to UniRef100_Q4S1K8 Cluster: Ch... 159 2e-38
gnl|LJGI|TC80233 similar to UniRef100_Q4T7P8 Cluster: Chromosome... 54 7e-07
gnl|LJGI|TC66377 similar to UniRef100_Q28256 Cluster: Platelet g... 54 7e-07
>gnl|LJGI|GO036647
Length = 510
Score = 347 bits (175), Expect = 3e-95
Identities = 175/175 (100%)
Strand = Plus / Minus
Query: 1 atgaatggttcgagaaggacctcactctccgcgagttgtttgaaagcctccctgacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atgaatggttcgagaaggacctcactctccgcgagttgtttgaaagcctccctgacttct 410
Query: 61 ttgacaagggaaggggagggttggtcggagttggggtggtcgccggcgccggagtcggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttgacaagggaaggggagggttggtcggagttggggtggtcgccggcgccggagtcggag 350
Query: 121 atgggtatgaggcggcggaggtggtggagcataaatgtttggatttttgtcagac 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atgggtatgaggcggcggaggtggtggagcataaatgtttggatttttgtcagac 295
Score = 274 bits (138), Expect = 4e-73
Identities = 141/142 (99%)
Strand = Plus / Minus
Query: 256 aaagagtggaatgttctgagacggaggaggtcgtcggcgccggagttggaggtggcggtg 315
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaagagtggaatgttctaagacggaggaggtcgtcggcgccggagttggaggtggcggtg 155
Query: 316 gtggtggagcagagaaagagaacgagaagggttagtgacagtgtggattgttctgagacg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gtggtggagcagagaaagagaacgagaagggttagtgacagtgtggattgttctgagacg 95
Query: 376 gaggaggaatgccatagctgat 397
||||||||||||||||||||||
Sbjct: 94 gaggaggaatgccatagctgat 73
>gnl|LJGI|TC68370 similar to UniRef100_Q6MYW6 Cluster: Basic proline-rich protein;
n=1; Aspergillus fumigatus|Rep: Basic proline-rich
protein - Aspergillus fumigatus (Sartorya fumigata),
partial (7%)
Length = 814
Score = 168 bits (85), Expect = 2e-41
Identities = 127/142 (89%), Gaps = 8/142 (5%)
Strand = Plus / Minus
Query: 263 ggaatgttctgagacggaggaggtcgtcggcgccggagttggaggtgg--------cggt 314
|||||||||| || |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 193 ggaatgttctcaggcggaggaggtcgccggcgccggagttggaggtggagaggaggcggt 134
Query: 315 ggtggtggagcagagaaagagaacgagaagggttagtgacagtgtggattgttctgagac 374
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 133 ggtggtggagcagagaaagagaacgagaagggttagtcaaagtgtggattgttctgagac 74
Query: 375 ggaggaggaatgccatagctga 396
|||||||||| ||||| |||||
Sbjct: 73 ggaggaggaaagccatggctga 52
Score = 131 bits (66), Expect = 4e-30
Identities = 96/106 (90%)
Strand = Plus / Minus
Query: 69 ggaaggggagggttggtcggagttggggtggtcgccggcgccggagtcggagatgggtat 128
|||||||||||| | || |||||| ||||||||||||| ||||||||||||| ||| ||
Sbjct: 393 ggaaggggaggggttgttggagtttgggtggtcgccggtgccggagtcggaggtggataa 334
Query: 129 gaggcggcggaggtggtggagcataaatgtttggatttttgtcaga 174
||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 333 gaggcggcggaggtggtggagcagaaatgtttggatttttctcaga 288
>gnl|LJGI|BW605523 weakly similar to UniRef100_Q4S1K8 Cluster: Chromosome 6 SCAF14768,
whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 6 SCAF14768, whole genome
shotgun sequence - Tetraodon nigroviridis (Green
puffer), partial (13%)
Length = 470
Score = 159 bits (80), Expect = 2e-38
Identities = 131/149 (87%), Gaps = 8/149 (5%)
Strand = Plus / Minus
Query: 256 aaagagtggaatgttctgagacggaggaggtcgtcggcgccggagttggaggtgg----- 310
||||||||||||||||| || |||||||||||| ||||||||||| |||||||||
Sbjct: 223 aaagagtggaatgttctcaggcggaggaggtcgccggcgccggagctggaggtggagagg 164
Query: 311 ---cggtggtggtggagcagagaaagagaacgagaagggttagtgacagtgtggattgtt 367
|| ||||||||||||| ||||| |||||||||||||||||| |||||||||||||||
Sbjct: 163 aggcgttggtggtggagcatagaaacagaacgagaagggttagttacagtgtggattgtt 104
Query: 368 ctgagacggaggaggaatgccatagctga 396
|||||||||| |||||||||||| |||||
Sbjct: 103 ctgagacggacgaggaatgccatggctga 75
Score = 129 bits (65), Expect = 1e-29
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 6 tggttcgagaaggacctcactctccgcgagttgtttgaaagcctccctgacttctttgac 65
||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 470 tggttcgagaaagacatcactctccgcgagttgtttgaaagcctccctgatttctttgac 411
Query: 66 aagggaaggggagggttggtc 86
||||||||||||||| |||||
Sbjct: 410 aagggaaggggaggggtggtc 390
>gnl|LJGI|TC80233 similar to UniRef100_Q4T7P8 Cluster: Chromosome undetermined
SCAF8055, whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8055,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer), partial (4%)
Length = 1199
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 324 gcagagaaagagaacgagaagggttagtgacagtgtggattgttctgagacggaggagga 383
|||||||||||||| | ||||| |||| |||| ||||| ||||||||||||||||||
Sbjct: 159 gcagagaaagagaagggtttgggtttgtgaaagtggggattcttctgagacggaggagga 100
Query: 384 atg 386
|||
Sbjct: 99 atg 97
>gnl|LJGI|TC66377 similar to UniRef100_Q28256 Cluster: Platelet glycoprotein Ib alpha
chain precursor; n=1; Canis lupus familiaris|Rep:
Platelet glycoprotein Ib alpha chain precursor - Canis
familiaris (Dog), partial (4%)
Length = 1281
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 90 gttggggtggtcgccggcgccggagtcggag 120
|||||||||||||||||||||||||| ||||
Sbjct: 195 gttggggtggtcgccggcgccggagttggag 165
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 49 tccctgacttctttgacaagggaaggggagggttggtcggagttggggtggtcgc 103
||||||| |||| ||| |||||||||| |||| |||| ||||||||||| |||||
Sbjct: 326 tccctgagttctctgagaagggaagggaaggggtggttggagttggggtcgtcgc 272