Miyakogusa Predicted Gene

Lj0g3v0186359.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0186359.1 Non Chatacterized Hit- tr|C4J481|C4J481_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,52.54,0.00007,
,26997_g.1
         (202 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79195 similar to UniRef100_Q9FH10 Cluster: Serine/thr...   323   2e-88
gnl|LJGI|TC59486 similar to UniRef100_A7PDW6 Cluster: Chromosome...   127   3e-29

>gnl|LJGI|TC79195 similar to UniRef100_Q9FH10 Cluster: Serine/threonine protein
           kinase-like; n=1; Arabidopsis thaliana|Rep:
           Serine/threonine protein kinase-like - Arabidopsis
           thaliana (Mouse-ear cress), partial (12%)
          Length = 543

 Score =  323 bits (163), Expect = 2e-88
 Identities = 166/167 (99%)
 Strand = Plus / Minus

                                                                       
Query: 36  tttatgcacaggtccaaaccctccttctccaaggaagttgctggaggagaagccctgtgt 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 543 tttatgcacaggtccaaaccctccttctccaaggaagttgctggaggagaagccccgtgt 484

                                                                       
Query: 96  gatgatcttgagctcagctagtgtgaaaacatggaggttagaacctgctagagaaattga 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gatgatcttgagctcagctagtgtgaaaacatggaggttagaacctgctagagaaattga 424

                                                          
Query: 156 gagatcctcattgaatgctgtggcgcttggaaaactcaaatccgaca 202
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gagatcctcattgaatgctgtggcgcttggaaaactcaaatccgaca 377


>gnl|LJGI|TC59486 similar to UniRef100_A7PDW6 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 895

 Score =  127 bits (64), Expect = 3e-29
 Identities = 139/164 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgagaccaggcctgagcttatcatcaatgaaccctttatgcacaggtccaaaccctcct 60
           |||||||||||||| ||||| ||||||||||| || |||||||| |||||||| || |||
Sbjct: 537 atgagaccaggcctaagcttgtcatcaatgaaacccttatgcactggtccaaatccacct 478

                                                                       
Query: 61  tctccaaggaagttgctggaggagaagccctgtgtgatgatcttgagctcagctagtgtg 120
           ||||| ||||| ||||| || || |||  ||||||||| |  ||||||||||| |  |||
Sbjct: 477 tctcctaggaaattgctagaagaaaagtgctgtgtgataactttgagctcagccacagtg 418

                                                       
Query: 121 aaaacatggaggttagaacctgctagagaaattgagagatcctc 164
           ||| |||| | |||||  ||||||||||||||||||||||||||
Sbjct: 417 aaagcatgaatgttagttcctgctagagaaattgagagatcctc 374