Miyakogusa Predicted Gene
- Lj0g3v0186219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0186219.1 Non Chatacterized Hit- tr|F4IN72|F4IN72_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,64.91,0.000000000000009,seg,NULL; RNase III
domain-like,Ribonuclease III domain; Ribonuclease III
family,Ribonuclease III
do,NODE_34288_length_1750_cov_19.158857.path1.1
(1620 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61205 similar to UniRef100_A7PLN1 Cluster: Chromosome... 696 0.0
gnl|LJGI|AU251535 similar to UniRef100_A7PLN1 Cluster: Chromosom... 579 e-164
gnl|LJGI|AV777410 similar to UniRef100_A7PLN1 Cluster: Chromosom... 157 3e-37
>gnl|LJGI|TC61205 similar to UniRef100_A7PLN1 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 2143
Score = 696 bits (351), Expect = 0.0
Identities = 914/1099 (83%), Gaps = 2/1099 (0%)
Strand = Plus / Plus
Query: 490 aatccggcgaagatgctcgatacgctgctgtatttggcatttcagcaccccaagtgtgag 549
|||||||||||| | | ||||| ||||||| ||||| |||||||| || ||||||
Sbjct: 657 aatccggcgaagcagtttgatactttgctgtacttggcgtttcagcatccttcttgtgag 716
Query: 550 aggtcgagggcgaggcacgtgaggtgtgcgcactcgaggttggtgtttctggggcagtat 609
||| ||| ||||||||||||||||| | ||| ||||||||| |||||||||||||| |
Sbjct: 717 aggacgaaggcgaggcacgtgaggtcggggcattcgaggttgttgtttctggggcagcac 776
Query: 610 gtgttggagctggcgttggcggagtttttcttgcagaggtacccgagggagtcgcccgga 669
||| | || ||||| || || || |||||||||||||| |||||||||||||| ||
Sbjct: 777 gtgcttgaattggcgctgtgtgaattcttcttgcagaggtatccgagggagtcgccgggg 836
Query: 670 ccgatgagggagcgggtttttgggttgattgggaagaggagcttgcccatgtggattaaa 729
|||||||||||| | || | ||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 837 ccgatgagggagagagtgtatggtttgattgggaagaggagcttgcctaagtggattaaa 896
Query: 730 gctgcgagtttgcagaatttgatattccccaatgttaatatggataagttggttaggaag 789
||||| || |||||||||||| | || || ||| | |||| |||||| || | ||||||
Sbjct: 897 gctgctagcttgcagaatttggtgtttccatatgatgatattgataagatgttgaggaag 956
Query: 790 gacagggagccgatcg-taaagtctgtattctgggctttgtttggggcaatatatctgtg 848
|| | |||| || | ||||||| || || |||||||||||||||||||| ||||| ||
Sbjct: 957 gataaggagg-gacctataaagtcggtcttttgggctttgtttggggcaatctatctttg 1015
Query: 849 ttttggcatgccagaagtgtatcgtgttctttttgaagtctttggaatggatctagaagc 908
|||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1016 ttttggtatgccagaagtgtaccgtgttctttttgaagtctttggaatggatccagatgc 1075
Query: 909 tgagtattgccagccaaaattgcgtaggcaacttgaagatatagatcatgtatctgctga 968
|||| |||||||||| | ||||| || |||||||||||| | ||| ||||||| ||||
Sbjct: 1076 tgaggattgccagcctaggttgcgcagacaacttgaagatgtggattatgtatcaactga 1135
Query: 969 atttaaaggcaagctaagctggcaagatgtggttgcatataagcctcctgcagatgccct 1028
|| || |||||| || ||||||||| | ||| |||||||||||||| ||||||| ||
Sbjct: 1136 gttagaaaccaagctcagttggcaagatatagttacatataagcctcctccagatgctct 1195
Query: 1029 gtttgcaaatccacggctgttcagagcttgtatccccccaggcatgcatcggtttagagg 1088
||||||| ||||| | ||||||||||||||| | |||||||||||||||||||| |||||
Sbjct: 1196 gtttgcacatccaagactgttcagagcttgtgttcccccaggcatgcatcggttcagagg 1255
Query: 1089 aaatatatgggattatgatagcagaccccaagtaatgcgaatcctcggatatccattaga 1148
|||||| ||||||| |||| ||| ||||||||| ||| | || ||||||||||||||
Sbjct: 1256 aaatatctgggattttgattgcaaaccccaagttatgaaagcacttggatatccattaga 1315
Query: 1149 tatggaagatagaattccaggaattactgatgctaggaacatagagcttggacttggatt 1208
||| || || || | || ||||||||| || |||||||||||||||||||| |||||
Sbjct: 1316 aatgactgacaggatacaagaaattactgaagccaggaacatagagcttggactcggatt 1375
Query: 1209 gcagctatgtttcttgcatccatcaaattacaagttcgaacatcctcgattttgctacga 1268
|||||| |||||| ||||||||||||| ||||| || || |||||||||||||||| |||
Sbjct: 1376 gcagctttgtttcatgcatccatcaaagtacaaatttgagcatcctcgattttgcttcga 1435
Query: 1269 gagattagaataccttggccagaagatacaggatttggtgatggctgaaagattgttgat 1328
|||||||||||| |||| || ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1436 gagattagaatatgttgggcaaaagatacaggatttggttatggctgagagattattgat 1495
Query: 1329 gaagcatttagatgctcctgggttctggatacaagaaaagcaccgccgcatacttatgaa 1388
|||||||||||||||||| ||| | ||| ||||||| | || || ||| | ||||||||
Sbjct: 1496 gaagcatttagatgctccgggggtgtggctacaagagagacatcgtcgcgttcttatgaa 1555
Query: 1389 caagtattgtggaagatatttgagggccaaacaactccaccattacattatatattctga 1448
||| | |||||||||||||||||||||||||| |||||| || || |||||| |||
Sbjct: 1556 caaacactgtggaagatatttgagggccaaacatctccacggttttatgatatatcatga 1615
Query: 1449 taaggttaaagatgcttacgggcgcagtcatagactgagaaacccggccacaacatctgt 1508
| |||| |||| |||| | ||||| ||| ||||||||| ||| ||||| ||||
Sbjct: 1616 aacggttcaagactcttatgagcgcaacaggagaaggagaaacccagcctcaacagctgt 1675
Query: 1509 tcaacaagcccttcacgggctttcatatgctgtatatgggaagcgtgatgtaagacgtct 1568
||| ||||| ||||| |||||||||||| |||||||||||| |||||||| |||||| |
Sbjct: 1676 tcaccaagctcttcatgggctttcatatcttgtatatgggaaacgtgatgtgagacgttt 1735
Query: 1569 gatgtttgaggtttttgac 1587
||||||||| |||||||||
Sbjct: 1736 gatgtttgaagtttttgac 1754
>gnl|LJGI|AU251535 similar to UniRef100_A7PLN1 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 359
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 atgttagaattttcttctccccacacacaaatggagctttcttcttcctttctacttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atgttagaattttcttctccccacacacaaatggagctttcttcttcctttctacttccc 127
Query: 61 cataaaccacttcactcatcatcctatttacacaacccacttcgaatcaccacaaaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cataaaccacttcactcatcatcctatttacacaacccacttcgaatcaccacaaaaacc 187
Query: 121 cgacaccccaccacccaaatcctccgtatttccgcggtggccatcgacccgccgccgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgacaccccaccacccaaatcctccgtatttccgcggtggccatcgacccgccgccgcag 247
Query: 181 gagcttcctcagaacagtccccgccgcctcctgcaggagctcgccgaacgcaagagaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gagcttcctcagaacagtccccgccgcctcctgcaggagctcgccgaacgcaagagaccc 307
Query: 241 tctccgaaaagaagagcaccgccgagaaggttcgtcctcactcctccggtta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tctccgaaaagaagagcaccgccgagaaggttcgtcctcactcctccggtta 359
>gnl|LJGI|AV777410 similar to UniRef100_A7PLN1 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 596
Score = 157 bits (79), Expect = 3e-37
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 1010 agcctcctgcagatgccctgtttgcaaatccacggctgttcagagcttgtatccccccag 1069
|||||||| ||||||| ||||||||| ||||| | ||||||||||||||| | |||||||
Sbjct: 480 agcctcctccagatgctctgtttgcacatccaagactgttcagagcttgtgttcccccag 421
Query: 1070 gcatgcatcggtttagaggaaatatatgggattatgatagcagaccccaagtaatgcgaa 1129
||||||||||||| ||||||||||| ||||||| |||| ||| ||||||||| ||| |
Sbjct: 420 gcatgcatcggttcagaggaaatatctgggattttgattgcaaaccccaagttatgaaag 361
Query: 1130 tcctcggatatccattagatatggaagatagaattccaggaattactgatgctaggaaca 1189
|| |||||||||||||| ||| || || || | || ||||||||| || |||||||
Sbjct: 360 cacttggatatccattagaaatgactgacaggatacaagaaattactgaagccaggaaca 301
Query: 1190 tagagcttggacttggattgcag 1212
||||||||||||| |||||||||
Sbjct: 300 tagagcttggactcggattgcag 278