Miyakogusa Predicted Gene
- Lj0g3v0185729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0185729.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,83.24,0,PROTEIN
TRANSPORT PROTEIN SEC23,NULL; zf-Sec23_Sec24,Zinc finger,
Sec23/Sec24-type; Sec23_trunk,Sec2,CUFF.11805.1
(601 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosom... 1170 0.0
gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome... 98 8e-20
gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/... 82 5e-15
>gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined
scaffold_108, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 812
Score = 1170 bits (590), Expect = 0.0
Identities = 600/602 (99%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 1 atggcggaattcgtagatctcgaatcccaagacggcgtgcgcatgccgtggaacgtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcggaattcgtagatctcgaatcccaagacggcgtgcgcatgccgtggaacgtgatc 204
Query: 61 cccggcaccaagcaagaggccacgaacgccgtcgttccggtggcggcaatctacactccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cccggcaccaagcaagaggccacgaacgccgtcgttccggtggcggcaatctacactccc 264
Query: 121 ataaagcactttccctcgatgcccgtcctcccttacaccccgcttcgctgtcgcacgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaagcactttccctcgatgcccgtcctcccttacaccccgcttcgctgtcgcacgtgc 324
Query: 181 cgctccatcctcaaccccttctgcatggtcgacttcgtcgccaagatctggatctgcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgctccatcctcaaccccttctgcatggtcgacttcgtcgccaagatctggatctgcccc 384
Query: 241 ttctgcttcaaccgcaaccacttcccccctcactacgcctccatctccgacgacaacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctgcttcaaccgcaaccacttcccccctcactacgcctccatctccgacgacaacctc 444
Query: 301 cccgccgagctcttcccccactacactaccgtcgagtacgattccccctccgacacctcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccgccgagctcttcccccactacactaccgtcgagtacgattccccctccgacacctcc 504
Query: 361 ccgcacgtgccccccgtcttcctcttcgtcatcgacacgtgcgtcattgaggaggagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccgcacgtgccccccgtcttcctcttcgtcatcgacacgtgcgtcattgaggaggagatc 564
Query: 421 ggcttcctgaggtccgccgtctcccagcccgtcgagctcctgccggagaattcccttgtc 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 565 ggcttcctgaggtccgccgtctcccaggccgtcgagctcctgccggagaattcccttgtc 624
Query: 481 ggactcatcaccttcgggaccttcgtccatgtccacg-gctcgggttcggtcttgtcccc 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 ggactcatcaccttcgggaccttcgtccatgtccacgagctcgggttcggtcttgtcccc 684
Query: 540 aaaacctacgttttcaggggctccaaggacgtttctaaggaccagctgctcgagcagatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaacctacgttttcaggggctccaaggacgtttctaaggaccagctgctcgagcagatg 744
Query: 600 ag 601
||
Sbjct: 745 ag 746
>gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 816
Score = 97.6 bits (49), Expect = 8e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 183 ctccatcctcaaccccttctgcatggtcgacttcgtcgccaagatctggatctgcccctt 242
|||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 366 ctccctccttaaccccttctgcatcgtcgatttcaccgccaagatctggatctgcccctt 425
Query: 243 ctgcttcaaccgcaaccacttcccccctcactacgcc 279
||||||| |||||| |||||| ||||||||||||
Sbjct: 426 ctgcttctcccgcaataccttccctcctcactacgcc 462
>gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/T25N20_16; n=1;
Arabidopsis thaliana|Rep: At1g05520/T25N20_16 -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 533
Score = 81.8 bits (41), Expect = 5e-15
Identities = 109/129 (84%), Gaps = 2/129 (1%)
Strand = Plus / Plus
Query: 208 gtcgacttcgtcgccaagatctggatctgccccttctgct-tcaaccgcaaccacttccc 266
||||||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 297 gtcgacttcaccgccaagatctggatctgccccttctgctatcaa-cgcaaccatttccc 355
Query: 267 ccctcactacgcctccatctccgacgacaacctccccgccgagctcttcccccactacac 326
||||||||| | |||||||||| ||| ||||||| || |||| ||| || |||||
Sbjct: 356 tcctcactacaacgccatctccgagaccaatctccccggtgaactctaccctcaatacac 415
Query: 327 taccgtcga 335
||||||||
Sbjct: 416 caccgtcga 424