Miyakogusa Predicted Gene
- Lj0g3v0185499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0185499.1 tr|B8IML9|B8IML9_METNO Sel1 domain protein
repeat-containing protein (Precursor)
OS=Methylobacterium,35.71,1.7,seg,NULL,CUFF.11783.1
(376 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72653 homologue to UniRef100_Q8HYZ5 Cluster: Alkaline... 460 e-129
gnl|LJGI|FS340621 similar to UniRef100_A7NX17 Cluster: Chromosom... 58 4e-08
gnl|LJGI|TC62951 similar to UniRef100_A7NX17 Cluster: Chromosome... 58 4e-08
gnl|LJGI|TC62151 similar to UniRef100_A7NX17 Cluster: Chromosome... 58 4e-08
>gnl|LJGI|TC72653 homologue to UniRef100_Q8HYZ5 Cluster: Alkaline phosphatase; n=1;
Sus scrofa|Rep: Alkaline phosphatase - Sus scrofa (Pig),
partial (6%)
Length = 494
Score = 460 bits (232), Expect = e-129
Identities = 238/240 (99%)
Strand = Plus / Minus
Query: 1 atgggagcaaacaacacgaggtggttttcaatcgtcatcttcggcgtgattccgattacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgggagcaaacaacacgaggtggttttcaatcgtcatcttcggcgtgattccgattacc 309
Query: 61 tacacatcaagaacaaaaggagtgaagagattgaaacagagtgagagaagagatctttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tacacatcaagaacaaaaggagtgaagagattgaaacagagtgagagaagagatctttca 249
Query: 121 ctttctcgggaaaatggagaattctatcatttcctgcactatgcgcgatctcaatttggc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 248 ctttctcgggaaaatggagaattctatcatttcctgcactatgcgcgatcccaatttggc 189
Query: 181 tcgccgtcaagatcgatggacaccactgcgcttcctctggacggcactgctagggttcga 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcgccgtcaagatcggtggacaccactgcgcttcctctggacggcactgctagggttcga 129
Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 305 accttcaccgcctctccgcttctctcacagcacgaagaaaaaggctccgcaatcagat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 accttcaccgcctctccgcttctctcacagcacgaagaaaaaggctccgcaatcagat 30
>gnl|LJGI|FS340621 similar to UniRef100_A7NX17 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 658
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 109 agagatctttcactttctcgggaaaatggagaattct 145
|||||||||||| |||||||||||||||||| |||||
Sbjct: 96 agagatctttcattttctcgggaaaatggaggattct 132
>gnl|LJGI|TC62951 similar to UniRef100_A7NX17 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 748
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 109 agagatctttcactttctcgggaaaatggagaattct 145
|||||||||||| |||||||||||||||||| |||||
Sbjct: 182 agagatctttcattttctcgggaaaatggaggattct 218
>gnl|LJGI|TC62151 similar to UniRef100_A7NX17 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1672
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 109 agagatctttcactttctcgggaaaatggagaattct 145
|||||||||||| |||||||||||||||||| |||||
Sbjct: 129 agagatctttcattttctcgggaaaatggaggattct 165