Miyakogusa Predicted Gene
- Lj0g3v0185409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0185409.1 Non Chatacterized Hit- tr|I3T9J9|I3T9J9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,80.21,0,DUF640,Domain of unknown function DUF640; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.11776.1
(538 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61313 98 7e-20
gnl|LJGI|BW595790 96 3e-19
gnl|LJGI|TC60100 78 6e-14
gnl|LJGI|TC75394 similar to UniRef100_A7QMV1 Cluster: Chromosome... 60 1e-08
gnl|LJGI|TC59125 similar to UniRef100_Q1ECH8 Cluster: At1g78815;... 58 6e-08
>gnl|LJGI|TC61313
Length = 777
Score = 97.6 bits (49), Expect = 7e-20
Identities = 214/269 (79%)
Strand = Plus / Plus
Query: 100 gactggaacacctttggccagtacttgaagaacctgacaccgccaatttcagtgtctcag 159
||||||||||| ||||| ||||||||||| |||| || ||| ||| || || | ||||||
Sbjct: 156 gactggaacacttttgggcagtacttgaataaccagagacccccagttccactttctcag 215
Query: 160 tgcaacttcaaccacgtgctggacttccttcggtacctcgaccagttcgggaagaccaag 219
||||| |||||||| || |||| || ||| ||||||| ||||| || |||||||||||
Sbjct: 216 tgcaatttcaaccatgtcatggaatttcttaggtacctagaccaatttgggaagaccaaa 275
Query: 220 gtccacttgcacggctgcatcttcttcggccaacctgacccgccggcgccctgcacctgc 279
|| ||| | || || ||| | | ||||| || || || ||||| |||||||| |||
Sbjct: 276 gttcaccttcaagggtgcgtgtatttcgggatgccagagcctccggcaccctgcacgtgc 335
Query: 280 cctctcaggcaggcttgggggagccttgacgcgctcatcggaaggcttagagccgcctat 339
|||||||| || |||||||| ||||| ||||| ||||| || ||||| || || ||||||
Sbjct: 336 cctctcagacaagcttggggcagcctagacgctctcatagggaggctcagggctgcctat 395
Query: 340 gaagagcacggcggctcaccggagactaa 368
|| || |||| || ||||| ||||||||
Sbjct: 396 gaggaaaacggtggatcacctgagactaa 424
>gnl|LJGI|BW595790
Length = 478
Score = 95.6 bits (48), Expect = 3e-19
Identities = 150/184 (81%)
Strand = Plus / Plus
Query: 158 agtgcaacttcaaccacgtgctggacttccttcggtacctcgaccagttcgggaagacca 217
||||||||| ||||||||| |||| ||||| || ||||| |||||||||||||||||||
Sbjct: 209 agtgcaactgcaaccacgtcttggatttcctccgttaccttgaccagttcgggaagacca 268
Query: 218 aggtccacttgcacggctgcatcttcttcggccaacctgacccgccggcgccctgcacct 277
|||| ||| |||| || ||||| |||| ||| || || || || || |||| ||| | |
Sbjct: 269 aggttcacctgcaaggttgcatgttctacgggcagcccgaaccccccgcgcggtgcccgt 328
Query: 278 gccctctcaggcaggcttgggggagccttgacgcgctcatcggaaggcttagagccgcct 337
|||| | || |||||||||||||||||||| || ||||| || ||||| ||||| || |
Sbjct: 329 gcccgttgagacaggcttgggggagccttgatgctctcatagggaggctcagagctgctt 388
Query: 338 atga 341
||||
Sbjct: 389 atga 392
>gnl|LJGI|TC60100
Length = 829
Score = 77.8 bits (39), Expect = 6e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 268 ccctgcacctgccctctcaggcaggcttgggggagccttgacgcgctcatcggaaggctt 327
||||||||||||||||||| || || ||||| ||||| |||||||||||||||||| |
Sbjct: 339 ccctgcacctgccctctcaaacaagcgtggggaagcctcgacgcgctcatcggaaggtta 398
Query: 328 agagccgcctatgaagagcacggcggctcaccggagactaatccctt 374
|||| ||||| ||||| |||| || | |||||||||||||||||
Sbjct: 399 cgagctgcctacgaagaaaacggaggtttgccggagactaatccctt 445
>gnl|LJGI|TC75394 similar to UniRef100_A7QMV1 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 736
Score = 60.0 bits (30), Expect = 1e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 257 acccgccggcgccctgcacctgccctctcaggcaggcttgggggagccttgacgcgctca 316
||||||| || |||||| ||||||| ||| ||||||| ||||| || || ||||||||||
Sbjct: 58 acccgcctgctccctgcccctgcccgctccggcaggcatggggaagtctcgacgcgctca 117
Query: 317 tcggaaggcttagagccgcctatgaagagcacgg 350
||||| | || | ||||||||||| ||| ||||
Sbjct: 118 tcggacgtctacgcgccgcctatgaggagaacgg 151
>gnl|LJGI|TC59125 similar to UniRef100_Q1ECH8 Cluster: At1g78815; n=1; Arabidopsis
thaliana|Rep: At1g78815 - Arabidopsis thaliana
(Mouse-ear cress), partial (73%)
Length = 979
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 292 gcttgggggagccttgacgcgctcatcggaaggcttagagccgcctatgaaga 344
||||||||||||||||| || ||||| || ||||||||||| || ||||||||
Sbjct: 409 gcttgggggagccttgatgctctcattgggaggcttagagctgcttatgaaga 461
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 420 tcaggcaaaggctagagggatcccatacacaaagaaaaagaagaaga 466
|||||| ||||||||||||||||| || | ||||||||||||||||
Sbjct: 537 tcaggctaaggctagagggatcccttataagaagaaaaagaagaaga 583