Miyakogusa Predicted Gene
- Lj0g3v0185399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0185399.1 Non Chatacterized Hit- tr|K4CG49|K4CG49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.81,0.00000000000003,Myb_DNA-bind_4,NULL; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.11786.1
(846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70649 similar to UniRef100_A7QDK1 Cluster: Chromosome... 924 0.0
gnl|LJGI|TC79976 similar to UniRef100_A7QDK1 Cluster: Chromosome... 452 e-126
gnl|LJGI|TC77289 similar to UniRef100_A7QDK1 Cluster: Chromosome... 94 2e-18
gnl|LJGI|TC70613 similar to UniRef100_A7PJH5 Cluster: Chromosome... 94 2e-18
gnl|LJGI|TC78417 similar to UniRef100_A7QDK1 Cluster: Chromosome... 74 2e-12
>gnl|LJGI|TC70649 similar to UniRef100_A7QDK1 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1229
Score = 924 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 1 atgccggacttccacgattccctcacgccgccgtcgcgcccaacccccgtccgcgaggat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 75 atgccggacttccacgattccctcacgccgccgtcgcgtccaacccccgtccgcgaggat 134
Query: 61 tgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcgctacctcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcgctacctcgaa 194
Query: 121 ctcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgctgtcaacgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgctgtcaacgcc 254
Query: 181 ctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaatcgcatcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaatcgcatcgac 314
Query: 241 actatcaagaagaagtataagatcgagaaggctagggtttcgtcttccaacggtgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 actatcaagaagaagtataagatcgagaaggctagggtttcgtcttccaacggtgttgtt 374
Query: 301 tcatcttcctggccgttctatgaacggttagatgctctgattggtcccaattttaatccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcatcttcctggccgttctatgaacggttagatgctctgattggtcccaattttaatccg 434
Query: 361 aagaagtcttcctcctcgccttcgccatcgccgccgattgctctcccgttgttgccgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagaagtcttcctcctcgccttcgccatcgccgccgattgctctcccgttgttgccgcat 494
Query: 421 cggaagaattcttctccgtttcctgtgatcgccacgccgccgactgccgtggcg 474
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 495 cggaagaattcttctccgtttcctgtgaccgccacgccgccgactgccgtggcg 548
Score = 422 bits (213), Expect = e-117
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 634 aggttggcgaaggctatagagaggtttggggaagtgtatgagagaatggaggaacagaaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aggttggcgaaggctatagagaggtttggggaagtgtatgagagaatggaggaacagaaa 840
Query: 694 gtgaaacagatggtggatttggagaaacagaggatgcagtttactaaagatcttgagttg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gtgaaacagatggtggatttggagaaacagaggatgcagtttactaaagatcttgagttg 900
Query: 754 cagaggatgcagatgtttatggacacacaggttcagcttgagagaattaagcgcgggaaa 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagaggatgcagatgtttatggacacacaggttcagcttgagagaattaagcgcgggaaa 960
Query: 814 cgatctgggtcaaacgatatgtatagctagcca 846
|||||||||||||||||||||||||||||||||
Sbjct: 961 cgatctgggtcaaacgatatgtatagctagcca 993
>gnl|LJGI|TC79976 similar to UniRef100_A7QDK1 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 472
Score = 452 bits (228), Expect = e-126
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 1 atgccggacttccacgattccctcacgccgccgtcgcgcccaacccccgtccgcgaggat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 atgccggacttccacgattccctcacgccgccgtcgcgtccaacccccgtccgcgaggat 300
Query: 61 tgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcgctacctcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcgctacctcgaa 360
Query: 121 ctcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgctgtcaacgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgctgtcaacgcc 420
Query: 181 ctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaatc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaatc 472
>gnl|LJGI|TC77289 similar to UniRef100_A7QDK1 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 477
Score = 93.7 bits (47), Expect = 2e-18
Identities = 185/231 (80%)
Strand = Plus / Plus
Query: 51 ccgcgaggattgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcg 110
||||||||| |||||| ||||| ||| ||| ||| |||||||| |||||||| ||
Sbjct: 201 ccgcgaggactgctggagcgaggacgccaccttcacgctcgtcgatgcctggggcgaacg 260
Query: 111 ctacctcgaactcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgc 170
||||||||| |||||||| || | |||||| |||||| | |||||||| ||||||||| |
Sbjct: 261 ctacctcgagctcaaccgcggcagcctccgccagaagcactggcaggaggtcgccgacac 320
Query: 171 tgtcaacgccctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaa 230
||||||| || ||| | | || |||||| || ||| || || || || || |||||
Sbjct: 321 cgtcaacgaccgccacgccggcagtaagaaatcccgccggaccgacgtgcagtgcaagaa 380
Query: 231 tcgcatcgacactatcaagaagaagtataagatcgagaaggctagggtttc 281
|| |||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 381 ccgaatcgacacgctgaagaagaagtacaagatcgagaaggctagggtttc 431
>gnl|LJGI|TC70613 similar to UniRef100_A7PJH5 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 566
Score = 93.7 bits (47), Expect = 2e-18
Identities = 185/231 (80%)
Strand = Plus / Plus
Query: 51 ccgcgaggattgctggtctgaggaagcctcctccaccctcgtcgacgcctgggggagtcg 110
||||||||| |||||| ||||| ||| ||| ||| |||||||| |||||||| ||
Sbjct: 162 ccgcgaggactgctggagcgaggacgccaccttcacgctcgtcgatgcctggggcgaacg 221
Query: 111 ctacctcgaactcaaccgtggaaacctccgtcagaaggattggcaggatgtcgccgacgc 170
||||||||| |||||||| || | |||||| |||||| | |||||||| ||||||||| |
Sbjct: 222 ctacctcgagctcaaccgcggcagcctccgccagaagcactggcaggaggtcgccgacac 281
Query: 171 tgtcaacgccctccatggccacaccaagaaaaccttccgcacagatgttcaatgtaagaa 230
||||||| || ||| | | || |||||| || ||| || || || || || |||||
Sbjct: 282 cgtcaacgaccgccacgccggcagtaagaaatcccgccggaccgacgtgcagtgcaagaa 341
Query: 231 tcgcatcgacactatcaagaagaagtataagatcgagaaggctagggtttc 281
|| |||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct: 342 ccgaatcgacacgctgaagaagaagtacaagatcgagaaggctagggtttc 392
>gnl|LJGI|TC78417 similar to UniRef100_A7QDK1 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 460
Score = 73.8 bits (37), Expect = 2e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 703 atggtggatttggagaaacagaggatgcagtttactaaagatcttgagttgcagaggatg 762
|||||||| |||||||| ||||||||||||||| |||| ||| | || | |||||||||
Sbjct: 8 atggtggagttggagaagcagaggatgcagtttgctaaggatttggaatatcagaggatg 67
Query: 763 cagatgtttatggacacacaggttcagct 791
||| | || ||||| ||||||||||||||
Sbjct: 68 cagcttttcatggaaacacaggttcagct 96