Miyakogusa Predicted Gene
- Lj0g3v0185209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0185209.1 tr|G7JSX5|G7JSX5_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_4g050930 PE=4 SV=1,55.39,0,FBOX,F-box
domain, cyclin-like; F-box domain,F-box domain, cyclin-like; L
domain-like,NULL; FAMILY N,CUFF.11771.1
(1017 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 1970 0.0
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 206 2e-52
gnl|LJGI|DC595637 198 5e-50
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 139 4e-32
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 98 1e-19
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 92 8e-18
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 90 3e-17
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 84 2e-15
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 76 5e-13
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 68 1e-10
gnl|LJGI|BW595051 weakly similar to UniRef100_A2Q574 Cluster: Cy... 58 1e-07
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 1970 bits (994), Expect = 0.0
Identities = 1016/1024 (99%), Gaps = 7/1024 (0%)
Strand = Plus / Plus
Query: 1 atgtccaattcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtccaattcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaat 199
Query: 61 gagattgagactgatattgaagagaataaagacaggcttagtgacttacctgattgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gagattgagactgatattgaagagaataaagacaggcttagtgacttacctgattgtata 259
Query: 121 ctcctttacattttatcatttgtgaaagccaaacacgtagtccaaacatgcgtattatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctcctttacattttatcatttgtgaaagccaaacacgtagtccaaacatgcgtattatcc 319
Query: 181 aaaagatggaaggatctttggaaacatctcccaacccttattttacattcccttgacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaaagatggaaggatctttggaaacatctcccaacccttattttacattcccttgacttt 379
Query: 241 acccgtttgtcgagct-------tcaccaaattcgtgtctcgccttctgactcttcgcga 293
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 acccgtttgtcgagcttcaagcttcaccaaattcgtgtctcgccttctgactcttcgcga 439
Query: 294 tcgctcaaccgcgctgcacggtctagattttgagcgtcttggttgtattcagcctcacct 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcgctcaaccgcgctgcacggtctagattttgagcgtcttggttgtattcagcctcacct 499
Query: 354 cctcaaaaggattgtaaagtatgccgtttcacacaatgtgcagcgattaggattgactgt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctcaaaaggattgtaaagtatgccgtttcacacaatgtgcagcgattaggattgactgt 559
Query: 414 cacaacatctgatattgaacactttccgtattgcattttttcatctaagactctgacatc 473
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacaacatctgatatttaacactttccgtattgcattttttcatctaagactctgacatc 619
Query: 474 tcttaagctcatagcttaccgttacactaaaggaaataagagaacattatttccgaaatc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcttaagctcatagcttaccgttacactaaaggaaataagagaacattatttccgaaatc 679
Query: 534 tcttagtttgccagcactaactaccttgcatttagtgaattttgacttttgtgcaaatga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcttagtttgccagcactaactaccttgcatttagtgaattttgacttttgtgcaaatga 739
Query: 594 tgatggcattgttgctgagcccttttcagttttaaccaagttgaatagtttgatcattga 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgatggcattgttgctgagcccttttcagttttaaccaagttgaatagtttgatcattga 799
Query: 654 aaactgtaacctaagtggtgctgccaagatcctctgcatatcaagtaagacactgaccaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaactgtaacctaagtggtgctgccaagatcctctgcatatcaagtaagacactgaccaa 859
Query: 714 tttgactgtgcttcaccgttgtcattactaccaagtgcacttctcttctccaagtcttcg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tttgactgtgcttcaccgttgtcattactaccaagtgcacttctcttctccaagtcttcg 919
Query: 774 tacctttgcctttacgggcactccttttgagactatctgtggaagaaatatttcttccat 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 tacctttgcctttacgggcactccttttgagactatctgtggaagaaatatttcttccat 979
Query: 834 tgagcatgtaaattttgatatacattggaagtgtgaaaagtattcttttattctacttag 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 tgagcatgtaaattttgatatacattggaagtgtgaaaagtattcttttattctacttag 1039
Query: 894 ctggctggtagaccttaccaatataaaatcattgacggtttccacaagtactcttcaggt 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 ctggctggtagaccttaccaatataaaatcattgacggtttccacaagtactcttcaggt 1099
Query: 954 tctcatctcaattcctcatttgttagagtataagtatcctatcttgggtagcttgaagtc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tctcatctcaattcctcatttgttagagtataagtatcctatcttgggtagcttgaagtc 1159
Query: 1014 attg 1017
||||
Sbjct: 1160 attg 1163
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 206 bits (104), Expect = 2e-52
Identities = 332/408 (81%)
Strand = Plus / Plus
Query: 1 atgtccaattcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaat 60
||||| |||||||| ||||| |||||| ||| |||||| || ||||||||||| | |
Sbjct: 77 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 136
Query: 61 gagattgagactgatattgaagagaataaagacaggcttagtgacttacctgattgtata 120
|| ||| | ||| | |||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 137 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 196
Query: 121 ctcctttacattttatcatttgtgaaagccaaacacgtagtccaaacatgcgtattatcc 180
|||||| ||||| |||||||||||||||||||| || || ||||| ||| |||| |||
Sbjct: 197 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 256
Query: 181 aaaagatggaaggatctttggaaacatctcccaacccttattttacattcccttgacttt 240
| ||||||||||||||| ||||||| ||| || |||| || ||| ||| |||||
Sbjct: 257 acaagatggaaggatctctggaaacgtcttccttccctcatactactgtcctcaaacttt 316
Query: 241 acccgtttgtcgagcttcaccaaattcgtgtctcgccttctgactcttcgcgatcgctca 300
| |||||||||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 317 tggacatataagagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcg 376
Query: 301 accgcgctgcacggtctagattttgagcgtcttggttgtattcagcctcacctcctcaaa 360
|||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 377 accgcgctgcacggtctagattttgagcatgatggtcacattcagcctcacctcctcaaa 436
Query: 361 aggattgtaaagtatgccgtttcacacaatgtgcagcgattaggattg 408
||||||||||| ||||| |||||||||||||| || ||||||||||||
Sbjct: 437 aggattgtaaaatatgctgtttcacacaatgtccaacgattaggattg 484
>gnl|LJGI|DC595637
Length = 209
Score = 198 bits (100), Expect = 5e-50
Identities = 177/203 (87%), Gaps = 2/203 (0%)
Strand = Plus / Plus
Query: 18 tgaaatgttattgcagccgaatgccaagagaggaaggaggaatgagattgagactgatat 77
|||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaatgttattgccgcccaatgcccagagaggaaggaggaatgagattgagactgatat 60
Query: 78 tgaagagaataaagacaggcttagtgacttacctgattgtatactcctttacattttatc 137
||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 61 tgaagagaataaagagcggcttagtgacttacctgattgtatactcccttaccttttatc 120
Query: 138 atttgtgaaagcc--aaacacgtagtccaaacatgcgtattatccaaaagatggaaggat 195
|||| | | || || | | | |||||| ||| |||||||| ||||||||||||||
Sbjct: 121 ctttgggnaggcnggaacccctnaatccaaanctgcctattatcccaaagatggaaggat 180
Query: 196 ctttggaaacatctcccaaccct 218
| ||||||||||| |||| ||||
Sbjct: 181 ccttggaaacatcccccacccct 203
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 139 bits (70), Expect = 4e-32
Identities = 163/194 (84%)
Strand = Plus / Plus
Query: 33 gccgaatgccaagagaggaaggaggaatgagattgagactgatattgaagagaataaaga 92
||||||||| ||||||||||| | | ||||| ||||||||| |||||||| || |||||
Sbjct: 140 gccgaatgcgaagagaggaagaaacagtgagactgagactgaaattgaagacaacaaaga 199
Query: 93 caggcttagtgacttacctgattgtatactcctttacattttatcatttgtgaaagccaa 152
|||||| |||||||| | |||||| || |||||| ||||||| |||||| ||| |||||
Sbjct: 200 caggctcagtgacttgcatgattgcattctccttcacattttgtcatttctgagcgccaa 259
Query: 153 acacgtagtccaaacatgcgtattatccaaaagatggaaggatctttggaaacatctccc 212
| ||| ||| | ||||||| | ||||||||||||||||||||||| ||||||| || ||
Sbjct: 260 atacgcagttcgaacatgcatgttatccaaaagatggaaggatctctggaaacgccttcc 319
Query: 213 aacccttattttac 226
| |||||||||||
Sbjct: 320 gaaccttattttac 333
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (6%)
Length = 881
Score = 97.6 bits (49), Expect = 1e-19
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 878 cttttattctacttagctggctggtagaccttaccaatataaaatcattgacggtttcca 937
|||| ||| |||| |||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 245 ctttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatctg 304
Query: 938 caagtactcttcaggttctcatctcaattcctcattt 974
|||| ||||||||||||||| || ||||||||||||
Sbjct: 305 caagaactcttcaggttctcttcctaattcctcattt 341
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 91.7 bits (46), Expect = 8e-18
Identities = 177/221 (80%), Gaps = 6/221 (2%)
Strand = Plus / Plus
Query: 1 atgtccaattcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaat 60
||||| |||||||| ||||| ||||| | | ||||||||| |||||||||||||
Sbjct: 93 atgtctaattcaactgatgagatgttgattccgccgaatgcgaagagaggaagga----- 147
Query: 61 gagattgagactgatattgaagagaataaagacaggcttagtgacttacctgattgtata 120
| | ||||| ||| | |||||| || ||||||||||| |||||| | |||||| | ||
Sbjct: 148 -acagtgagaatgaaaatgaagacaacaaagacaggctcagtgaccttcctgatggcatt 206
Query: 121 ctcctttacattttatcatttgtgaaagccaaacacgtagtccaaacatgcgtattatcc 180
|||||| |||||||||||||| |||| |||||| | | ||| |||||||| | |||||
Sbjct: 207 ctccttcacattttatcatttatgaatgccaaatatgcagttcaaacatgtatcttatcg 266
Query: 181 aaaagatggaaggatctttggaaacatctcccaacccttat 221
|||||||||||||| |||||||| || |||||||||||
Sbjct: 267 gctagatggaaggatctctggaaacaccttccaacccttat 307
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 89.7 bits (45), Expect = 3e-17
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 37 aatgccaagagaggaaggaggaatgagattgagactgatattgaagagaataaagacagg 96
||||| |||||||| ||| || ||||| ||||| ||| | ||||||||| ||||| ||
Sbjct: 328 aatgcaaagagaggtagggagagtgagagtgagagtgaaaatgaagagaacaaagataga 387
Query: 97 cttagtgacttacctgattgtatactcctttacattttatcatttgtgaaagccaaacac 156
|| |||||||| |||||||| | |||||| ||||| | ||||||||||| ||||| |
Sbjct: 388 ctcagtgacttgcctgattgcgttctccttcacattctgtcatttgtgaatgccaagtat 447
Query: 157 gtagtccaaacatgcgtattatccaaaagatggaaggatctttggaaac 205
| ||| ||||| ||| |||||||| ||||||||||||||| |||||||
Sbjct: 448 gcagttcaaacttgcacattatccacaagatggaaggatctctggaaac 496
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 83.8 bits (42), Expect = 2e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 884 ttctacttagctggctggtagaccttaccaatataaaatcattgacggtttccacaagta 943
||||||| |||||||||| ||| ||||| ||||| ||||||||||| || || |||| ||
Sbjct: 59 ttctactcagctggctggaagagcttactaatatcaaatcattgacagtctctacaaata 118
Query: 944 ctcttcaggttctcatctcaattcct 969
|||||||||||||| ||| |||||||
Sbjct: 119 ctcttcaggttctcttcttaattcct 144
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 75.8 bits (38), Expect = 5e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 91 gacaggcttagtgacttacctgattgtatactcctttacattttatcatttgtgaaagcc 150
|||||||||||||| || || ||||| | || ||| ||||||| |||||||||||||||
Sbjct: 254 gacaggcttagtgatttgcccgattgcgttctgcttcacattttgtcatttgtgaaagcc 313
Query: 151 aaacacgtagtccaaacatgcgtattatccaaaagatggaaggatctttggaaa 204
| | | ||| ||||| ||| ||||||||| ||||||||||||||| ||||||
Sbjct: 314 aggaatgcagttcaaacttgcatattatccacaagatggaaggatctatggaaa 367
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 67.9 bits (34), Expect = 1e-10
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 9 ttcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaatgagattga 68
|||||||||||| ||||| | | ||| ||||| |||||||| ||| | || || |||
Sbjct: 107 ttcaacagatgagatgttgattccgccaaatgcaaagagagggaggcacagtgggagtga 166
Query: 69 gactgatattgaagagaataaagacaggcttagtgacttacctgattgtatactccttta 128
|| ||| ||||||||||| |||||||||| ||||||||||| ||||| || |||||| |
Sbjct: 167 gaatgaaattgaagagaacgaagacaggctaagtgacttacccgattgcatcctccttca 226
Query: 129 cattttatcatttgtgaa 146
| |||| |||||| ||||
Sbjct: 227 ctttttgtcatttctgaa 244
>gnl|LJGI|BW595051 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (9%)
Length = 474
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 635 tgaatagtttgatcattgaaaactgtaac 663
|||||||||||||||||||||||||||||
Sbjct: 123 tgaatagtttgatcattgaaaactgtaac 151