Miyakogusa Predicted Gene

Lj0g3v0185019.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0185019.1 Non Chatacterized Hit- tr|I1FVB4|I1FVB4_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
GN,25.7,0.000000000002,Vps39_2,Vacuolar sorting protein
39/Transforming growth factor beta receptor-associated domain 2;
TG,CUFF.11742.1
         (651 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67218 similar to UniRef100_A7PUV1 Cluster: Chromosome...   250   9e-66
gnl|LJGI|TC63719 similar to UniRef100_A7PUV1 Cluster: Chromosome...   123   1e-27

>gnl|LJGI|TC67218 similar to UniRef100_A7PUV1 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 699

 Score =  250 bits (126), Expect = 9e-66
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaggatacaacccagaggctctgctgaaacgtcttccatcagatgctttatatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atgtcaggatacaacccagaggctctgctgaaacgtcttccatcagatgctttatatgaa 537

                                                                       
Query: 61  gagcgtgcaatattgttgggaaaaatgaaccaacatgaactaacattatctttgtatgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gagcgtgcaatattgttgggaaaaatgaaccaacatgaactaacattatctttgtatgtt 597

                 
Query: 121 cataag 126
           ||||||
Sbjct: 598 cataag 603


>gnl|LJGI|TC63719 similar to UniRef100_A7PUV1 Cluster: Chromosome chr4 scaffold_32,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_32, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 742

 Score =  123 bits (62), Expect = 1e-27
 Identities = 101/114 (88%)
 Strand = Plus / Plus

                                                                       
Query: 538 cttaaacttttacctaaggaaactaaacttcagaacttgctttcatttcttggacccctt 597
           ||||||||||| || || || |||||| | ||| |||||||||||||| ||| |||||||
Sbjct: 9   cttaaacttttgccaaaagagactaaattacaggacttgctttcatttattgaacccctt 68

                                                                 
Query: 598 ctgagaaaatctagtgaaatgtatcgtaattgctcggtggtccagagcttgaga 651
           ||||||||||||||||||||||| |||||||| |||||| || |||||||||||
Sbjct: 69  ctgagaaaatctagtgaaatgtaccgtaattgttcggtgatcaagagcttgaga 122