Miyakogusa Predicted Gene

Lj0g3v0181969.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0181969.1 tr|G7IRR0|G7IRR0_MEDTR Protein binding protein
OS=Medicago truncatula GN=MTR_2g094130 PE=4
SV=1,73.84,0,ZF_RING_CH,Zinc finger, RING-CH-type; no description,Zinc
finger, RING/FYVE/PHD-type; RINGv,Zinc fin,CUFF.11577.1
         (702 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome...   323   8e-88
gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromoso...    60   2e-08

>gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome chr8 scaffold_29,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 1291

 Score =  323 bits (163), Expect = 8e-88
 Identities = 491/600 (81%), Gaps = 9/600 (1%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgaaggaggggagacgttcaagatggaatgcagctgcaaaggtgaacttgctctggctca 74
           ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6   tgaaggaggtgagaccttcaagttggaatgcagctgcaaaggtgaacttgctctggctca 65

                                                                       
Query: 75  ccaagaatgtgctattaaatggttcagcatcaaaggtaacaagacttgtgatgtatgcaa 134
           | |||||||||||||||||||||| ||  | || ||||||||||| || ||||| |||||
Sbjct: 66  caaagaatgtgctattaaatggtttagtttgaagggtaacaagacctgcgatgtttgcaa 125

                                                                       
Query: 135 ggaggaggttcgtaacctccccgtcactcttttgaggatccaaaatgttcaaactcagaa 194
           |   || ||||  ||||| || || ||||| ||  |||| |||| ||||| || || || 
Sbjct: 126 gtcagaagttcaaaacctacctgtaactctattacggattcaaagtgttcgaaatcggat 185

                                                                       
Query: 195 tactggagcaaggtctcagcaggaagat------gacttcagggtttggcaggaactgcc 248
           || ||||   |||||||| | |||||||      |  | |||| ||||||||||| | ||
Sbjct: 186 tattggaagtaggtctcaactggaagatttagatggatacaggttttggcaggaagttcc 245

                                                                       
Query: 249 agtgcttgtcattgtcagcatgattgcttatttctgtttccttgagcagctattggttag 308
            ||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||  
Sbjct: 246 ggtgcttgtcattgtcagcatgcttgcctatttctgttttctggagcagctattggtttc 305

                                                                       
Query: 309 aaaaatgggaaccagagcaattttcatatctctcccgttttcctgtgtactaggtctact 368
           ||||||||||||  | || |||  ||||||||| || ||||| |||||||| ||||| ||
Sbjct: 306 aaaaatgggaactggcgcgattgccatatctcttccattttcttgtgtactgggtctgct 365

                                                                       
Query: 369 ctcctccatgacatcatcaaccatggtgaagagcagcaatttcatttggatttatgcagc 428
           |||||||||||| |||||||||||||||||||||||    ||||| ||||| |||||| |
Sbjct: 366 ctcctccatgacttcatcaaccatggtgaagagcag---gttcatctggatctatgcatc 422

                                                                       
Query: 429 tgtccaatttgctttggtggttatctttgcacacatattttactccttggttagtaagca 488
            |||||||||||| |||||||| |||| || || |||||||||||  |||||  |  |||
Sbjct: 423 cgtccaatttgctctggtggttctcttcgcgcatatattttactctgtggttcatgtgca 482

                                                                       
Query: 489 agcagttctaacaattcttctagcatcatttgctgggtttggcgtggtgatgagtggaag 548
           ||||||| |  |||| ||||| ||| |||||||||| ||||| ||||||||| |||| ||
Sbjct: 483 agcagttttgtcaatccttcttgcaacatttgctggttttggtgtggtgatgtgtgggag 542

                                                                       
Query: 549 ttcaattctcgcggagtttggcagatggagaagaagatggcgcactttatcagagcagca 608
           ||| || || | |||| ||   |||||||| || |||||||   ||||||||||||||||
Sbjct: 543 ttctatccttgtggaggtttttagatggaggaggagatggcaagctttatcagagcagca 602


>gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromosome chr12 scaffold_18,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_18, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (15%)
          Length = 1429

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                        
Query: 43   tgcagctgcaaaggtgaacttgctctggctcaccaagaatgtgctattaaatggttcagc 102
            ||||| || |||||||| ||||| || ||||||||||| |||||  | || ||||| || 
Sbjct: 1302 tgcagttgtaaaggtgagcttgcacttgctcaccaagactgtgcagtaaagtggtttagt 1243

                                                  
Query: 103  atcaaaggtaacaagacttgtgatgtatgcaaggagga 140
            |||||||| || ||||| |||||||| |||||| ||||
Sbjct: 1242 atcaaaggaaataagacctgtgatgtctgcaagcagga 1205