Miyakogusa Predicted Gene

Lj0g3v0181809.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0181809.1 tr|G7JWW1|G7JWW1_MEDTR HGWP repeat containing
protein-like protein OS=Medicago truncatula
GN=MTR_5g0,46.43,0.00000000000004,Transposase_24,Transposase,
Ptta/En/Spm, plant,CUFF.11564.1
         (255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS362188 weakly similar to UniRef100_A4PY47 Cluster: TN...   220   3e-57
gnl|LJGI|DC594063                                                     133   6e-31

>gnl|LJGI|FS362188 weakly similar to UniRef100_A4PY47 Cluster: TNP1, related; n=1;
           Medicago truncatula|Rep: TNP1, related - Medicago
           truncatula (Barrel medic), partial (19%)
          Length = 715

 Score =  220 bits (111), Expect = 3e-57
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                       
Query: 145 atgaaaatgtctgaaacgaatgccttaaatagacaaaaacaaactataccgcacacgctt 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atgaaaatgtctgaaacgaatgccttaaatagacaaaaacaaactataccgcacacgctt 616

                                                              
Query: 205 ggcacaaagaccattgcaaggaagaggcatgagctggaaattgaaaccggc 255
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggcacaaagaccattgcaaggaagaggcatgagctggaaattgaaaccggc 565


>gnl|LJGI|DC594063 
          Length = 575

 Score =  133 bits (67), Expect = 6e-31
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggagggatagttgtgcgcggttgtttgctgaatgttacaaacctgcacttagttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgtggagggatagttgtgcgcggttgtttgctgaatgttacaaacctgcacttagttgg 562

                  
Query: 61  gaagcaa 67
           |||||||
Sbjct: 563 gaagcaa 569