Miyakogusa Predicted Gene

Lj0g3v0181719.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0181719.1 Non Chatacterized Hit- tr|C0HHI9|C0HHI9_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,34.92,1e-18,ZINC FINGER,
CCHC DOMAIN CONTAINING 11,NULL; POLY(A) POLYMERASE CID
(PAP)-RELATED,NULL; no descripti,CUFF.11581.1
         (963 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO021541 weakly similar to UniRef100_A7PIP3 Cluster: Ch...  1074   0.0  
gnl|LJGI|TC73070 weakly similar to UniRef100_A7PIP3 Cluster: Chr...   276   2e-73

>gnl|LJGI|GO021541 weakly similar to UniRef100_A7PIP3 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (35%)
          Length = 815

 Score = 1074 bits (542), Expect = 0.0
 Identities = 591/598 (98%), Gaps = 7/598 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcacacgtagtatgttggatattgttctacacgatatacttcgggtggtcacaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgagcacacgtagtatgttggatattgttctacacgatatacttcgggtggtcacaccc 277

                                                                       
Query: 61  ttacaagaagattgggcgatacgttttgcaattattaatgatttccgaagcattgttgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttacaagaagattgggcgatacgttttgcaattattaatgatttccgaagcattgttgaa 337

                                                                       
Query: 121 tctgtggaaagcctgagaggagcaactgttgagccatatggatcatttgtatctaatctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctgtggaaagcctgagaggagcaactgttgagccatatggatcatttgtatctaatctc 397

                                                                       
Query: 181 ttcacacgatggggtgacctggatatttcaattgagttatcaaatggttcacatatttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttcacacgatggggtgacctggatatttcaattgagttatcaaatggttcacatatttca 457

                                                                       
Query: 241 tctattgggaaaaatcaaaaacagaggttattgggagatcttataaaagctttgaaactg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tctattgggaaaaatcaaaaacagaggttattgggagatcttataaaagctttgaaactg 517

                                                                       
Query: 301 aaaggtggatggatcaacttgcagttcatctcccatgcgcgagttcccattttaatattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaaggtggatggatcaacttgcagttcatctcccatgcgcgagttcccattttaatattc 577

                                                                       
Query: 361 aaaagccgccgacagggtgtatcttgtgacatttcaatcaataacctgcagggtgtgatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aaaagccgccgacagggtgtatcttgtgacatttcaatcaataacctgcagggtgtgatc 637

                                                                       
Query: 421 aaatccaagcttttgctttggattgacaggatagatggccgctttcgagatatggtttta 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 638 aaatccaagcttttgctttggattgaca-gatagatggccgctttcgagatatggtttta 696

                                                                       
Query: 481 gtggtaaaggaatgggccaaagcacataaaatcaataactctaaaactggaactttcaac 540
           |||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 697 gtggtaaagg-atgggccaaagcacat-aaatc-ataactct-aaactggaactttc-ac 751

                                                                     
Query: 541 tcgtattctctcagtttgctagtaatctttcactttcagacatgtgttcctgcaattt 598
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 752 tcgtattctctcagtttgctagt-atctttcactttcagacatgtgttcctgcaattt 808


>gnl|LJGI|TC73070 weakly similar to UniRef100_A7PIP3 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (24%)
          Length = 873

 Score =  276 bits (139), Expect = 2e-73
 Identities = 139/139 (100%)
 Strand = Plus / Plus

                                                                       
Query: 699 cataaaccgaatcatatctgacaaatccaggccaattaacagaaaatctttgcctgaact 758
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   cataaaccgaatcatatctgacaaatccaggccaattaacagaaaatctttgcctgaact 61

                                                                       
Query: 759 ttttgttgaattcttaagaaagtttgctcaaatggattcatgggcctcagagctgggaat 818
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ttttgttgaattcttaagaaagtttgctcaaatggattcatgggcctcagagctgggaat 121

                              
Query: 819 ttgcccatataccggacaa 837
           |||||||||||||||||||
Sbjct: 122 ttgcccatataccggacaa 140