Miyakogusa Predicted Gene

Lj0g3v0181699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0181699.1 Non Chatacterized Hit- tr|K4C5K6|K4C5K6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.93,0.000000000000006,seg,NULL,CUFF.11550.1
         (561 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV406366 similar to UniRef100_A0U0U1 Cluster: Secretion...   803   0.0  

>gnl|LJGI|AV406366 similar to UniRef100_A0U0U1 Cluster: Secretion protein HlyD
           precursor; n=1; Burkholderia cenocepacia MC0-3|Rep:
           Secretion protein HlyD precursor - Burkholderia
           cenocepacia MC0-3, partial (3%)
          Length = 412

 Score =  803 bits (405), Expect = 0.0
 Identities = 405/405 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcctcacactcaggcttcattcgccaccggcccgccgcacgtgacctattttcgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   atgaagcctcacactcaggcttcattcgccaccggcccgccgcacgtgacctattttcgt 67

                                                                       
Query: 61  cgcgcacgtgcctcgccatccaagactcatcttccgctgccgcaccacgaagtccggcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  cgcgcacgtgcctcgccatccaagactcatcttccgctgccgcaccacgaagtccggcgc 127

                                                                       
Query: 121 gtttggaccgccaaacgccgccgtgtcagcttatccgtccgccacccgaaccgcgtcgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gtttggaccgccaaacgccgccgtgtcagcttatccgtccgccacccgaaccgcgtcgtc 187

                                                                       
Query: 181 gccgcatggaaacccgaacattccgaccggagcgagagggaagactccgtcgagccaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gccgcatggaaacccgaacattccgaccggagcgagagggaagactccgtcgagccaaca 247

                                                                       
Query: 241 acggatagtgctcgagctcgaagcagccggcgaggcgtcctggtcgcgccgttcctggcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acggatagtgctcgagctcgaagcagccggcgaggcgtcctggtcgcgccgttcctggcc 307

                                                                       
Query: 301 gccggcgcgtcgtttctgctctccgcagcgagagcggaagagaaatcgccgccaccatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gccggcgcgtcgtttctgctctccgcagcgagagcggaagagaaatcgccgccaccatct 367

                                                        
Query: 361 ccgtcgccgacaccgtcgtctccggcggcggcggaattgacggct 405
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ccgtcgccgacaccgtcgtctccggcggcggcggaattgacggct 412