Miyakogusa Predicted Gene
- Lj0g3v0181669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0181669.1 Non Chatacterized Hit- tr|K4CG05|K4CG05_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,25.2,9e-19,B3
DNA binding domain,B3 DNA binding domain; no description,DNA-binding
pseudobarrel domain; DNA-bin,CUFF.11549.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Tra... 1310 0.0
gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Tr... 135 6e-31
>gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (24%)
Length = 744
Score = 1310 bits (661), Expect = 0.0
Identities = 671/673 (99%), Gaps = 1/673 (0%)
Strand = Plus / Plus
Query: 1 atgacgactcgcaacatgccaaataatcactctccaatccttttctttaagatcatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgacgactcgcaacatgccaaataatcactctccaatccttttctttaagatcatcaca 131
Query: 61 acgacaagtattgaagc-tggagagcttaggattccaaacaatttcactaagagatatgg 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 132 acgacaagtattgaagcgtggagagcttaggattccaaacaatttcactaagacatatgg 191
Query: 120 tggtgatatgtcaaacccaatgtttctcaagcctccagatggaactgaatggcaaatatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tggtgatatgtcaaacccaatgtttctcaagcctccagatggaactgaatggcaaatatg 251
Query: 180 tcatagtaaaactgatggggatgtttggtttcaaaatggttggaaagattttgcgaaata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcatagtaaaactgatggggatgtttggtttcaaaatggttggaaagattttgcgaaata 311
Query: 240 ttactccctcgatcacggacacatggtgttgtttgaatacaaggattcttctcattttgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttactccctcgatcacggacacatggtgttgtttgaatacaaggattcttctcattttgg 371
Query: 300 ggtacatatatttgataagagcacccttgaaataagatatccttcacatgagaatcaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggtacatatatttgataagagcacccttgaaataagatatccttcacatgagaatcaaga 431
Query: 360 tgaagagcacaaccctgatcagattgatgatgactctgttgagatattggataagatacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgaagagcacaaccctgatcagattgatgatgactctgttgagatattggataagatacc 491
Query: 420 tccttgcaagaagactaaactgaaatcaccaatgtcgtgtcctaaaccacgcaagaaatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tccttgcaagaagactaaactgaaatcaccaatgtcgtgtcctaaaccacgcaagaaatt 551
Query: 480 gagaaccagtacaagtgaagatgttggagaaaggcctgaattgcacaacttgcctaaaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gagaaccagtacaagtgaagatgttggagaaaggcctgaattgcacaacttgcctaaaca 611
Query: 540 agtcaaaattgaagatgatgtcagtggaaatactgaatgccttgaaagggaggacttaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agtcaaaattgaagatgatgtcagtggaaatactgaatgccttgaaagggaggacttaac 671
Query: 600 ttccaaaatcactgaagctttgaacagagccagaactttccaatctaaaattccctcctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttccaaaatcactgaagctttgaacagagccagaactttccaatctaaaattccctcctt 731
Query: 660 catgactgtcatg 672
|||||||||||||
Sbjct: 732 catgactgtcatg 744
>gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (20%)
Length = 409
Score = 135 bits (68), Expect = 6e-31
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 29 actctccaatccttttctttaagatcatcacaacgacaagtattgaagctggagagctta 88
||||| ||||| ||||||||||||||||||||| ||| | |||||||||||| | ||||
Sbjct: 118 actctgcaatctgtttctttaagatcatcacaacaacatgcattgaagctggaaaactta 177
Query: 89 ggattccaaacaatttcactaagagatatggtggtgatatgtcaaacccaatgtttctca 148
| | ||||| ||||| ||||| ||| ||||||||||| |||||||| | ||||||
Sbjct: 178 agctcccaaatggtttcattaagaaatacagtggtgatatgccaaacccagtaattctca 237
Query: 149 agcctccagatggaactgaatggcaaatatgtcatagtaaaactgatggggatgtttggt 208
|||| || ||| ||| ||| | ||| | |||||| |||| ||| ||||||
Sbjct: 238 agccccctgataacactagttgggagatacattggagtaaacatgattctgatatttggt 297
Query: 209 ttcaaaatggttggaaagattttgcgaaatattactccctcgatcacggacacatggtgt 268
||||||| |||||| |||| ||||||||||||||||||||| | || || ||| |||| |
Sbjct: 298 ttcaaaagggttgggaagaatttgcgaaatattactccctctaccatgggcacttggttt 357
Query: 269 tgtttgaatacaaggattcttctcattttggggtacatatatttgataagag 320
||||||||| ||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 358 tgtttgaattcaaggatgcttctcattttggggtgcatatatttgacaagag 409