Miyakogusa Predicted Gene
- Lj0g3v0181109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0181109.1 tr|B9MTC1|B9MTC1_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_916069
PE=3,53.85,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF588,Uncharacterised protein family UPF,CUFF.11506.1
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72628 similar to UniRef100_A7PI43 Cluster: Chromosome... 977 0.0
gnl|LJGI|TC80885 similar to UniRef100_A7PI43 Cluster: Chromosome... 565 e-160
gnl|LJGI|GO011238 similar to UniRef100_A7PI43 Cluster: Chromosom... 389 e-107
>gnl|LJGI|TC72628 similar to UniRef100_A7PI43 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 913
Score = 977 bits (493), Expect = 0.0
Identities = 534/552 (96%), Gaps = 18/552 (3%)
Strand = Plus / Plus
Query: 1 atgtccatggttcgcccttcagttcacccagtggaagctccacctctcaccgaccatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atgtccatggttcgcccttcagttcacccagtggaagctccacctctcaccgaccatgca 170
Query: 61 actcccattcacaccatgaaggacatccaaggcatgcccggaaccctcggcgggttgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 actcccattcacaccatgaaggacatccaaggcatgcccggaaccctc------------ 218
Query: 121 ctcctcggcggtttgctcctccgcttccttcaattctccttcgcccttgtttccctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ------ggcggtttgctcctccgcttccttcaattctccttcgcccttgtttccctctct 272
Query: 181 gtcatggccaccacctctgatttcccttcagtcaccgccttccgctacctggttgctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtcatggccaccacctctgatttcccttcagtcaccgccttccgctacctggttgctgct 332
Query: 241 gtcagcctgcaaagcttgtggagcctctctttggcaattgctgatatatatgccatttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtcagcctgcaaagcttgtggagcctctctttggcaattgctgatatatatgccatttta 392
Query: 301 gtgagacggggcttccggaatccgagaattgtcagcttattctctgttggtgatgggatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtgagacggggcttccggaatccgagaattgtcagcttattctctgttggtgatgggatc 452
Query: 361 acttcaacacttacattttctgcagcctgtgcttctgctggtatcacagtccttattggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acttcaacacttacattttctgcagcctgtgcttctgctggtatcacagtccttattggc 512
Query: 421 aatgatctgaatgagtgtgcacaaaaccattgcagcaggtttgagacagcgacagccatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aatgatctgaatgagtgtgcacaaaaccattgcagcaggtttgagacagcgacagccatg 572
Query: 481 gcatttatgagttggtttgctgcttcgccctcgtttattttgaatttctggactttggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcatttatgagttggtttgctgcttcgccctcgtttattttgaatttctggactttggcc 632
Query: 541 tccaagtaaaag 552
||||||||||||
Sbjct: 633 tccaagtaaaag 644
>gnl|LJGI|TC80885 similar to UniRef100_A7PI43 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 690
Score = 565 bits (285), Expect = e-160
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 260 ggagcctctctttggcaattgctgatatatatgccattttagtgagacggggcttccgga 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggagcctctctttggcaattgctgatatatatgccattttagtgagacggggcttccgga 263
Query: 320 atccgagaattgtcagcttattctctgttggtgatgggatcacttcaacacttacatttt 379
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 atccgagaattgtcagcttattctctgttggtggtgggatcacttcaacacttacatttt 323
Query: 380 ctgcagcctgtgcttctgctggtatcacagtccttattggcaatgatctgaatgagtgtg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgcagcctgtgcttctgctggtatcacagtccttattggcaatgatctgaatgagtgtg 383
Query: 440 cacaaaaccattgcagcaggtttgagacagcgacagccatggcatttatgagttggtttg 499
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 cacaaaaccattgcagcaggtttgaaacagcgacagccatggcatttatgagttggtttg 443
Query: 500 ctgcttcgccctcgtttattttgaatttctggactttggcctccaagtaaaag 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgcttcgccctcgtttattttgaatttctggactttggcctccaagtaaaag 496
>gnl|LJGI|GO011238 similar to UniRef100_A7PI43 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 603
Score = 389 bits (196), Expect = e-107
Identities = 196/196 (100%)
Strand = Plus / Plus
Query: 357 gatcacttcaacacttacattttctgcagcctgtgcttctgctggtatcacagtccttat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gatcacttcaacacttacattttctgcagcctgtgcttctgctggtatcacagtccttat 169
Query: 417 tggcaatgatctgaatgagtgtgcacaaaaccattgcagcaggtttgagacagcgacagc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tggcaatgatctgaatgagtgtgcacaaaaccattgcagcaggtttgagacagcgacagc 229
Query: 477 catggcatttatgagttggtttgctgcttcgccctcgtttattttgaatttctggacttt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 catggcatttatgagttggtttgctgcttcgccctcgtttattttgaatttctggacttt 289
Query: 537 ggcctccaagtaaaag 552
||||||||||||||||
Sbjct: 290 ggcctccaagtaaaag 305