Miyakogusa Predicted Gene

Lj0g3v0180849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0180849.1 Non Chatacterized Hit- tr|F6HI07|F6HI07_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.68,5e-16,seg,NULL,CUFF.11485.1
         (478 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76520 weakly similar to UniRef100_A7PZ23 Cluster: Chr...   728   0.0  

>gnl|LJGI|TC76520 weakly similar to UniRef100_A7PZ23 Cluster: Chromosome chr4
           scaffold_39, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_39, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (52%)
          Length = 476

 Score =  728 bits (367), Expect = 0.0
 Identities = 367/367 (100%)
 Strand = Plus / Plus

                                                                       
Query: 68  caacactctctctggttctcgcatcgtggttgcgatcaacaatggcggagagcactgaca 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20  caacactctctctggttctcgcatcgtggttgcgatcaacaatggcggagagcactgaca 79

                                                                       
Query: 128 gcaacggcgtctacgtcgaccacgaacaacaagaagaccaacaaaagccgccaccgccgc 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  gcaacggcgtctacgtcgaccacgaacaacaagaagaccaacaaaagccgccaccgccgc 139

                                                                       
Query: 188 cgctgcagcagcgtcggagaaagcatggactggtgacaacggagactttacccgaggtcc 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cgctgcagcagcgtcggagaaagcatggactggtgacaacggagactttacccgaggtcc 199

                                                                       
Query: 248 tcaaccgtctcgtcaccgacatcctgttcccgggaccagccgacgacgcctccctgcttc 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcaaccgtctcgtcaccgacatcctgttcccgggaccagccgacgacgcctccctgcttc 259

                                                                       
Query: 308 gccggatcaaggcgtccgtcgccggcaacgctcctctccttccggaagcttctagaaact 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gccggatcaaggcgtccgtcgccggcaacgctcctctccttccggaagcttctagaaact 319

                                                                       
Query: 368 ccgccagccacgtcatcgtctggactcgccgcggcagccccctccgcgcgcttctcgtta 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccgccagccacgtcatcgtctggactcgccgcggcagccccctccgcgcgcttctcgtta 379

                  
Query: 428 tctccgt 434
           |||||||
Sbjct: 380 tctccgt 386