Miyakogusa Predicted Gene
- Lj0g3v0180799.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0180799.1 tr|A7SCA4|A7SCA4_NEMVE Predicted protein
OS=Nematostella vectensis GN=v1g210064 PE=4
SV=1,48,6e-19,NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT,NULL;
ETC_C1_NDUFA5,ETC complex I subunit,CUFF.11494.1
(513 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59384 similar to UniRef100_A7QGA4 Cluster: Chromosome... 1017 0.0
gnl|LJGI|BP055887 similar to UniRef100_Q8W544 Cluster: NADH-ubiq... 398 e-110
gnl|LJGI|TC71764 similar to UniRef100_A7PMP4 Cluster: Chromosome... 129 2e-29
>gnl|LJGI|TC59384 similar to UniRef100_A7QGA4 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (98%)
Length = 773
Score = 1017 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1 atgtttctgcgtgcggtggcgcggccattgatggcgaagatgaaggagacgacggggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgtttctgcgtgcggtggcgcggccattgatggcgaagatgaaggagacgacggggata 118
Query: 61 gtggggctggacgtggtgccgaacgcgagggaggtgctgattgggctgtacaacaagacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gtggggctggacgtggtgccgaacgcgagggaggtgctgattgggctgtacaacaagacg 178
Query: 121 ctgaccgagatccagaaggttccggaggacgaagggtaccggaaggcggtggagagtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ctgaccgagatccagaaggttccggaggacgaagggtaccggaaggcggtggagagtttc 238
Query: 181 acgaggcacaggctgaaggcgtgccaggaggaagaggactgggaggcaatcgagaatcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 acgaggcacaggctgaaggcgtgccaggaggaagaggactgggaggcaatcgagaatcgt 298
Query: 241 cttgggtgtggccaggtcgaggagctcatcgaggaggctcaagatgagctcaaactcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cttgggtgtggccaggtcgaggagctcatcgaggaggctcaagatgagctcaaactcatt 358
Query: 301 tcccacatgatcgaatgggatccatggggtgtaccagacgattatgaatgtgaagtgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tcccacatgatcgaatgggatccatggggtgtaccagacgattatgaatgtgaagtgatt 418
Query: 361 gaaaatgatgcaccagttcccaagcatgtccctctccaccgacctcatcctctccctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gaaaatgatgcaccagttcccaagcatgtccctctccaccgacctcatcctctccctaaa 478
Query: 421 gaattccatgatacacttgaggcactaatatccaaatcaggaaaagatacccctgctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaattccatgatacacttgaggcactaatatccaaatcaggaaaagatacccctgctgtc 538
Query: 481 agctccagtgattctccctcaaaggcatgatct 513
|||||||||||||||||||||||||||||||||
Sbjct: 539 agctccagtgattctccctcaaaggcatgatct 571
>gnl|LJGI|BP055887 similar to UniRef100_Q8W544 Cluster: NADH-ubiquinone
oxidoreductase; n=1; Retama raetam|Rep: NADH-ubiquinone
oxidoreductase - Retama raetam, partial (38%)
Length = 488
Score = 398 bits (201), Expect = e-110
Identities = 201/201 (100%)
Strand = Plus / Minus
Query: 313 gaatgggatccatggggtgtaccagacgattatgaatgtgaagtgattgaaaatgatgca 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gaatgggatccatggggtgtaccagacgattatgaatgtgaagtgattgaaaatgatgca 286
Query: 373 ccagttcccaagcatgtccctctccaccgacctcatcctctccctaaagaattccatgat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccagttcccaagcatgtccctctccaccgacctcatcctctccctaaagaattccatgat 226
Query: 433 acacttgaggcactaatatccaaatcaggaaaagatacccctgctgtcagctccagtgat 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acacttgaggcactaatatccaaatcaggaaaagatacccctgctgtcagctccagtgat 166
Query: 493 tctccctcaaaggcatgatct 513
|||||||||||||||||||||
Sbjct: 165 tctccctcaaaggcatgatct 145
>gnl|LJGI|TC71764 similar to UniRef100_A7PMP4 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr14 scaffold_21, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (11%)
Length = 757
Score = 129 bits (65), Expect = 2e-29
Identities = 102/113 (90%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 319 gatccatggggtgtaccagacgattatgaatgtgaagtgattgaaaatgatgcaccagtt 378
||||| |||||||| |||||||||||||||||||| | |||| |||||||||||||||
Sbjct: 200 gatccttggggtgtcccagacgattatgaatgtgaggcttttgacaatgatgcaccagtt 259
Query: 379 cccaagcatgtccctctccaccgacctcatcctctccctaaagaattccatga 431
|| |||||||||| |||||| ||||||| ||||||||||||||||||||||||
Sbjct: 260 cc-aagcatgtccttctccatcgacctcctcctctccctaaagaattccatga 311