Miyakogusa Predicted Gene
- Lj0g3v0180319.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0180319.1 Non Chatacterized Hit- tr|A9PHY4|A9PHY4_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,33.07,0.0000000006,ARM_REPEAT,Armadillo;
IBB,Importin-alpha, importin-beta-binding domain; IMPORTIN ALPHA,NULL;
Arm,Arm,CUFF.11449.1
(561 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59122 similar to UniRef100_A1YUL9 Cluster: Impa2; n=1... 1112 0.0
gnl|LJGI|BW627374 similar to UniRef100_A1YUL9 Cluster: Impa2; n=... 710 0.0
gnl|LJGI|TC74697 homologue to UniRef100_A7PRV4 Cluster: Chromoso... 107 7e-23
>gnl|LJGI|TC59122 similar to UniRef100_A1YUL9 Cluster: Impa2; n=1; Nicotiana
benthamiana|Rep: Impa2 - Nicotiana benthamiana, partial
(53%)
Length = 926
Score = 1112 bits (561), Expect = 0.0
Identities = 561/561 (100%)
Strand = Plus / Plus
Query: 1 atgtcgctccgcccaaatgccagaaccgacatccgccgcaaccgctacaagatcgccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgtcgctccgcccaaatgccagaaccgacatccgccgcaaccgctacaagatcgccgtc 126
Query: 61 gacgccgaagagggccgccgtaggagagaggacaacctcgtcgagatacgcaaaaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gacgccgaagagggccgccgtaggagagaggacaacctcgtcgagatacgcaaaaccaag 186
Query: 121 cgcgaggagagcttgcagaagaagcgccgtgagggccttcaagatcaccaacagctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgcgaggagagcttgcagaagaagcgccgtgagggccttcaagatcaccaacagctctcc 246
Query: 181 actcctcttctcgacagcaagctagagagtattccttccatggttaatggtgtctgctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 actcctcttctcgacagcaagctagagagtattccttccatggttaatggtgtctgctcg 306
Query: 241 gttgataataatctgcagctggaagccaccgcgcagttccgcaagcttctttcaatggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gttgataataatctgcagctggaagccaccgcgcagttccgcaagcttctttcaatggaa 366
Query: 301 cggaaccctccgattgaggaagttattcaatctggtgttgtaccgcgctttgttgagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cggaaccctccgattgaggaagttattcaatctggtgttgtaccgcgctttgttgagttt 426
Query: 361 cttgttagggaggatttccctcaacttcagtttgaggctgcgtgggctctcactaatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cttgttagggaggatttccctcaacttcagtttgaggctgcgtgggctctcactaatata 486
Query: 421 gcatcgggaacttctgagcatactaaggtggtgattgatcatggagctgttcctatcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gcatcgggaacttctgagcatactaaggtggtgattgatcatggagctgttcctatcttt 546
Query: 481 gtgaagctacttaattcacctaatggtgatgttcgggagcaggcagtgtgggctttgggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtgaagctacttaattcacctaatggtgatgttcgggagcaggcagtgtgggctttgggg 606
Query: 541 aatattgctggtgactcccca 561
|||||||||||||||||||||
Sbjct: 607 aatattgctggtgactcccca 627
>gnl|LJGI|BW627374 similar to UniRef100_A1YUL9 Cluster: Impa2; n=1; Nicotiana
benthamiana|Rep: Impa2 - Nicotiana benthamiana, partial
(21%)
Length = 477
Score = 710 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Plus
Query: 1 atgtcgctccgcccaaatgccagaaccgacatccgccgcaaccgctacaagatcgccgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgtcgctccgcccaaatgccagaaccgacatccgccgcaaccgctacaagatcgccgtc 179
Query: 61 gacgccgaagagggccgccgtaggagagaggacaacctcgtcgagatacgcaaaaccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gacgccgaagagggccgccgtaggagagaggacaacctcgtcgagatacgcaaaaccaag 239
Query: 121 cgcgaggagagcttgcagaagaagcgccgtgagggccttcaagatcaccaacagctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgcgaggagagcttgcagaagaagcgccgtgagggccttcaagatcaccaacagctctcc 299
Query: 181 actcctcttctcgacagcaagctagagagtattccttccatggttaatggtgtctgctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 actcctcttctcgacagcaagctagagagtattccttccatggttaatggtgtctgctcg 359
Query: 241 gttgataataatctgcagctggaagccaccgcgcagttccgcaagcttctttcaatggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gttgataataatctgcagctggaagccaccgcgcagttccgcaagcttctttcaatggaa 419
Query: 301 cggaaccctccgattgaggaagttattcaatctggtgttgtaccgcgctttgttgagt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cggaaccctccgattgaggaagttattcaatctggtgttgtaccgcgctttgttgagt 477
>gnl|LJGI|TC74697 homologue to UniRef100_A7PRV4 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (95%)
Length = 2465
Score = 107 bits (54), Expect = 7e-23
Identities = 237/298 (79%)
Strand = Plus / Plus
Query: 254 tgcagctggaagccaccgcgcagttccgcaagcttctttcaatggaacggaaccctccga 313
||||||| ||| |||| ||||||| |||||||| ||||| || ||||| | || ||||
Sbjct: 368 tgcagcttgaatccacgacgcagtttcgcaagctgctttcgattgaacgtactccgccga 427
Query: 314 ttgaggaagttattcaatctggtgttgtaccgcgctttgttgagtttcttgttagggagg 373
||||||| ||||| || |||||||| || | |||||||| |||||||| | ||||| |
Sbjct: 428 ttgaggaggttatacagtctggtgtagtttcccgctttgtcgagtttctgatgagggaag 487
Query: 374 atttccctcaacttcagtttgaggctgcgtgggctctcactaatatagcatcgggaactt 433
| || || ||| | ||||||||||| || |||||| | || |||||||| |||||||| |
Sbjct: 488 actttccgcaattgcagtttgaggcagcttgggctttgacaaatatagcttcgggaacat 547
Query: 434 ctgagcatactaaggtggtgattgatcatggagctgttcctatctttgtgaagctactta 493
| || | || |||||||||||||||||||| ||||| || || |||||| |||| ||
Sbjct: 548 cggaaaacaccaaggtggtgattgatcatggggctgtcccgatttttgtgcagcttctcg 607
Query: 494 attcacctaatggtgatgttcgggagcaggcagtgtgggctttggggaatattgctgg 551
||| |||| || ||| || || || |||||||||||||| || || ||| |||||||
Sbjct: 608 cttctcctagtgatgacgtccgtgaacaggcagtgtgggcattaggaaatgttgctgg 665