Miyakogusa Predicted Gene

Lj0g3v0179539.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0179539.1 tr|F2E9N2|F2E9N2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,57.83,2e-19,Rab subfamily
of small GTPases,Small GTPase superfamily, Rab type; SUBFAMILY NOT
NAMED,NULL; FAMILY ,25737_g.1
         (255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78859 homologue to UniRef100_A7PIM3 Cluster: Chromoso...   505   e-143

>gnl|LJGI|TC78859 homologue to UniRef100_A7PIM3 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 1001

 Score =  505 bits (255), Expect = e-143
 Identities = 255/255 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggccggaaataagtcggacctgaatcacctgagagcagtctcatcagaagatgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atgatggccggaaataagtcggacctgaatcacctgagagcagtctcatcagaagatgct 493

                                                                       
Query: 61  caaaacttggctgagaaggagagtctgtcatttctagagacttcagcattggaggcgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 caaaacttggctgagaaggagagtctgtcatttctagagacttcagcattggaggcgttg 553

                                                                       
Query: 121 aatgttgaaaaggcattccaaaccattttgtttgatatataccaaatcataagtagaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aatgttgaaaaggcattccaaaccattttgtttgatatataccaaatcataagtagaaag 613

                                                                       
Query: 181 gcattggcagcacaggaggcagcttctactactagcctccctcatgggactaccataaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gcattggcagcacaggaggcagcttctactactagcctccctcatgggactaccataaat 673

                          
Query: 241 gtgtcaaatttgtca 255
           |||||||||||||||
Sbjct: 674 gtgtcaaatttgtca 688