Miyakogusa Predicted Gene
- Lj0g3v0179219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0179219.1 Non Chatacterized Hit- tr|A5BN29|A5BN29_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.39,0.00000001,seg,NULL,CUFF.11352.1
(652 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chr... 922 0.0
gnl|LJGI|TC65060 weakly similar to UniRef100_A7QL36 Cluster: Chr... 176 1e-43
gnl|LJGI|BP065477 147 1e-34
gnl|LJGI|TC76662 weakly similar to UniRef100_A7QL36 Cluster: Chr... 147 1e-34
gnl|LJGI|TC82269 similar to UniRef100_Q0DJB3 Cluster: Os05g03050... 100 2e-20
>gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 849
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Plus
Query: 188 gagagggtgagcctgaagtaaacttgaatgaagatgaacacaatgttgagtcacaaattc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gagagggtgagcctgaagtaaacttgaatgaagatgaacacaatgttgagtcacaaattc 67
Query: 248 cacaaacacctatctatagcacaactgaaggagcaccaatgaatcaatctgaagcttctg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cacaaacacctatctatagcacaactgaaggagcaccaatgaatcaatctgaagcttctg 127
Query: 308 catctagaggtggaagacgtggggggaaaaaagccacacacaacgatgacatttctgaga 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 catctagaggtggaagacgtggggggaaaaaagccacacacaacgatgacatttctgaga 187
Query: 368 gcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttggtaatatgc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttggtaatatgc 247
Query: 428 aacaactaacatcttgctttttacctgagaaacaaactgctgatcggaggagtcaagttg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aacaactaacatcttgctttttacctgagaaacaaactgctgatcggaggagtcaagttg 307
Query: 488 ctgatatgttggaagaaatagaaggattatctccgatggaggtggtaagggcagctatct 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctgatatgttggaagaaatagaaggattatctccgatggaggtggtaagggcagctatct 367
Query: 548 tgatcaccaacgacaacaatctttgtgactgctttttctccatgcgtactcttgaaagga 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgatcaccaacgacaacaatctttgtgactgctttttctccatgcgtactcttgaaagga 427
Query: 608 agacggattttgtgcgctgtgttttaaataacaatggtgcatgaa 652
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agacggattttgtgcgctgtgttttaaataacaatggtgcatgaa 472
>gnl|LJGI|TC65060 weakly similar to UniRef100_A7QL36 Cluster: Chromosome undetermined
scaffold_116, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 787
Score = 176 bits (89), Expect = 1e-43
Identities = 358/444 (80%), Gaps = 9/444 (2%)
Strand = Plus / Plus
Query: 49 gttggtttgaatggaaaaccatttcctcaatttgacaatttggagattgtgtttgggaaa 108
||||||||| |||| ||||| |||||||| ||||| | | |||| |||||||||||||||
Sbjct: 10 gttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtgtttgggaaa 69
Query: 109 gacagagcaactggggctcatgcagaaagtccagctgatgctgcatttcctatgtataat 168
|| || ||||| || ||||||||||||||||||||||||| |||||| ||||| ||
Sbjct: 70 gatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgctatgatgaag 129
Query: 169 gagtattatcaacaaggaggagagggtgagcctgaagtaaacttgaatgaagatga--ac 226
|||| || || | || || || ||||||||||||||||| |||||||||||||| ||
Sbjct: 130 gagttttttccaacagaagaaggtggtgagcctgaagtaaatttgaatgaagatgataac 189
Query: 227 a-caatgttgagtcacaaattccacaaacacctatctatagcacaactgaaggagca--- 282
| ||| ||||||| ||| | ||| || ||||| ||| || ||| ||||||||
Sbjct: 190 aacaacattgagtctcaattcccagaagtacctacatatgacaacactcaaggagcaaga 249
Query: 283 ccaatgaatcaatctgaagcttctgcatctagaggtggaagacgtggggggaaaaaagcc 342
|||||| || ||| ||||||| ||||||||||||| | |||||| | |||||||||
Sbjct: 250 ccaatgggtct---tgatgcttctggatctagaggtggacggcgtgggtgtaaaaaagcc 306
Query: 343 acacacaacgatgacatttctgagagcttagtcacttctctgaacaaattaggtgagttt 402
| || || ||||||||| ||| ||||||| || ||| ||| |||||| ||||||||
Sbjct: 307 aagcagaatgatgacattagtgaaagcttagccaattcaatgagcaaatttggtgagttc 366
Query: 403 tatgctggaactgttggtaatatgcaacaactaacatcttgctttttacctgagaaacaa 462
|||||||||||||||| ||||| | | |||||||||||||||||||||||||||| |
Sbjct: 367 tatgctggaactgttgagaatattaaccgactaacatcttgctttttacctgagaaagag 426
Query: 463 actgctgatcggaggagtcaagtt 486
|| ||||||||||||| |||||||
Sbjct: 427 acagctgatcggaggactcaagtt 450
>gnl|LJGI|BP065477
Length = 549
Score = 147 bits (74), Expect = 1e-34
Identities = 158/186 (84%)
Strand = Plus / Minus
Query: 301 gcttctgcatctagaggtggaagacgtggggggaaaaaagccacacacaacgatgacatt 360
||||||| ||||||||||||| | |||||||| |||||||||| || || |||||||||
Sbjct: 400 gcttctggatctagaggtggacggcgtgggggtaaaaaagccaagcagaatgatgacatt 341
Query: 361 tctgagagcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttggt 420
||| ||||||| || ||| ||| |||||| |||||||| ||||||||||||||||
Sbjct: 340 agtgaaagcttagccaattcaatgagcaaatttggtgagttctatgctggaactgttgag 281
Query: 421 aatatgcaacaactaacatcttgctttttacctgagaaacaaactgctgatcggaggagt 480
||||| | | |||||||||||||||||||||||||||| | || ||||||||||||| |
Sbjct: 280 aatattaaccgactaacatcttgctttttacctgagaaagagacagctgatcggaggact 221
Query: 481 caagtt 486
||||||
Sbjct: 220 caagtt 215
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 193 ggtgagcctgaagtaaacttgaatgaagatga 224
||||||||||||||||| ||||||||||||||
Sbjct: 511 ggtgagcctgaagtaaatttgaatgaagatga 480
>gnl|LJGI|TC76662 weakly similar to UniRef100_A7QL36 Cluster: Chromosome undetermined
scaffold_116, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 641
Score = 147 bits (74), Expect = 1e-34
Identities = 158/186 (84%)
Strand = Plus / Plus
Query: 301 gcttctgcatctagaggtggaagacgtggggggaaaaaagccacacacaacgatgacatt 360
||||||| ||||||||||||| | |||||||| |||||||||| || || |||||||||
Sbjct: 394 gcttctggatctagaggtggacggcgtgggggtaaaaaagccaagcagaatgatgacatt 453
Query: 361 tctgagagcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttggt 420
||| ||||||| || ||| ||| |||||| |||||||| ||||||||||||||||
Sbjct: 454 agtgaaagcttagccaattcaatgagcaaatttggtgagttctatgctggaactgttgag 513
Query: 421 aatatgcaacaactaacatcttgctttttacctgagaaacaaactgctgatcggaggagt 480
||||| | | |||||||||||||||||||||||||||| | || ||||||||||||| |
Sbjct: 514 aatattaaccgactaacatcttgctttttacctgagaaagagacagctgatcggaggact 573
Query: 481 caagtt 486
||||||
Sbjct: 574 caagtt 579
Score = 109 bits (55), Expect = 2e-23
Identities = 103/119 (86%)
Strand = Plus / Plus
Query: 44 ctgctgttggtttgaatggaaaaccatttcctcaatttgacaatttggagattgtgtttg 103
|||| ||||||||| |||| ||||| |||||||| ||||| | | |||| ||||||||||
Sbjct: 222 ctgcagttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtgtttg 281
Query: 104 ggaaagacagagcaactggggctcatgcagaaagtccagctgatgctgcatttcctatg 162
||||||| || ||||| || ||||||||||||||||||||||||| |||||| |||||
Sbjct: 282 ggaaagatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgctatg 340
>gnl|LJGI|TC82269 similar to UniRef100_Q0DJB3 Cluster: Os05g0305000 protein; n=2;
Oryza sativa|Rep: Os05g0305000 protein - Oryza sativa
subsp. japonica (Rice), partial (15%)
Length = 1157
Score = 99.6 bits (50), Expect = 2e-20
Identities = 233/294 (79%)
Strand = Plus / Plus
Query: 359 tttctgagagcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttg 418
||||||| ||||| ||||||| |||||||||| |||||| |||||||| | ||| ||
Sbjct: 705 tttctgaaagcttgatcacttcattgaacaaattgggtgaggtttatgctcaagctgctg 764
Query: 419 gtaatatgcaacaactaacatcttgctttttacctgagaaacaaactgctgatcggagga 478
| ||| |||||||| |||||||| ||| ||| | ||||||| || ||||||||||| |
Sbjct: 765 aaagtattcaacaactgacatcttgttttatacatcagaaacagacagctgatcggagaa 824
Query: 479 gtcaagttgctgatatgttggaagaaatagaaggattatctccgatggaggtggtaaggg 538
||||||||| | || ||||||||||| ||||||||| | | || || ||||||
Sbjct: 825 atcaagttgcctccgttttagaagaaatagagggattatctacaacagaaatgataaggg 884
Query: 539 cagctatcttgatcaccaacgacaacaatctttgtgactgctttttctccatgcgtactc 598
||||||| |||||||||| | | ||||||| |||||||||||||| | ||| |||||
Sbjct: 885 cagctattttgatcaccagcaatgacaatctatgtgactgcttttttactatggatactc 944
Query: 599 ttgaaaggaagacggattttgtgcgctgtgttttaaataacaatggtgcatgaa 652
| |||| ||||| | | |||||| | ||||||||||||||||| ||| ||||
Sbjct: 945 tggaaatgaagaagcaatttgtggacattgttttaaataacaatgatgcttgaa 998