Miyakogusa Predicted Gene

Lj0g3v0178879.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0178879.1 Non Chatacterized Hit- tr|I1KM49|I1KM49_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.6,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Mem_trans,Auxin
efflux carrier,NODE_51933_length_2701_cov_105.654205.path2.1
         (946 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66383 homologue to UniRef100_Q8GV76 Cluster: Auxin ef...   133   2e-30
gnl|LJGI|FS335769 homologue to UniRef100_A2Q4I5 Cluster: Auxin E...   101   8e-21
gnl|LJGI|TC59920 homologue to UniRef100_A2Q4I5 Cluster: Auxin Ef...   101   8e-21

>gnl|LJGI|TC66383 homologue to UniRef100_Q8GV76 Cluster: Auxin efflux carrier
           protein; n=1; Medicago truncatula|Rep: Auxin efflux
           carrier protein - Medicago truncatula (Barrel medic),
           partial (23%)
          Length = 707

 Score =  133 bits (67), Expect = 2e-30
 Identities = 313/395 (79%)
 Strand = Plus / Plus

                                                                       
Query: 61  atgatcctagcgtacggctctgtccggtggtggaagattttctccccggaccagtgctcc 120
           |||||| |||| || || |||||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 311 atgatcttagcatatggttctgtccgttggtggaagatattctcaccggaccaatgttcc 370

                                                                       
Query: 121 ggcataaaccgtttcgtggcgatcttcgctgtgccgctgctctccttccacttcatctcc 180
           ||||||||||||||||||||  | ||||| || || || || |||||||| ||||| |||
Sbjct: 371 ggcataaaccgtttcgtggccgtattcgcggttccactcctttccttccatttcatttcc 430

                                                                       
Query: 181 accaacaacccgtacaccatgaacctccggttcatcgccgccgacacgctgcagaaggtg 240
           ||||||||||| |||   |||||| || |||||||||| || || || || |||||  | 
Sbjct: 431 accaacaacccttacgaaatgaacttcaggttcatcgctgcagatacacttcagaaaata 490

                                                                       
Query: 241 atcatgctgttcgcactcacaatctggaccaatttcaccgccaacggcagcctggagtgg 300
           |||||||| || ||  |     | ||||| |||||||||   || || ||||| || |||
Sbjct: 491 atcatgctctttgccttgtttctgtggacaaatttcaccaaaaatggtagccttgaatgg 550

                                                                       
Query: 301 atgatcaccatcttctccctgtccacattgcccaacacgcttgtcattggcattccactc 360
           ||||||||||||||||| ||  ||||  |||||||||| || ||||| || || ||  | 
Sbjct: 551 atgatcaccatcttctctcttaccactctgcccaacaccctcgtcatggggatccccttg 610

                                                                       
Query: 361 cttatcgccatgtacggcgaatactccggcgagcttatggtccaggtggtggtcctccag 420
            | ||||| ||||||||||| ||||| |||   || |||||||| ||||| || ||||| 
Sbjct: 611 ttaatcgctatgtacggcgattactcgggcaccctcatggtccaagtggttgtactccaa 670

                                              
Query: 421 tgcatcatttggtacacgctgctcctcttcctctt 455
           |||||||| |||||||| || ||| | ||||||||
Sbjct: 671 tgcatcatatggtacaccctcctcttattcctctt 705


>gnl|LJGI|FS335769 homologue to UniRef100_A2Q4I5 Cluster: Auxin Efflux Carrier; n=2;
           Medicago truncatula|Rep: Auxin Efflux Carrier - Medicago
           truncatula (Barrel medic), partial (26%)
          Length = 665

 Score =  101 bits (51), Expect = 8e-21
 Identities = 138/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 52  tacgtggctatgatcctagcgtacggctctgtccggtggtggaagattttctccccggac 111
           ||||||||||||||||| || |||||||| ||    |||||||| || |||   || |||
Sbjct: 277 tacgtggctatgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagac 336

                                                                       
Query: 112 cagtgctccggcataaaccgtttcgtggcgatcttcgctgtgccgctgctctccttccac 171
           |||||||| ||||| |||||||| || ||  | ||||| || || ||||| |||||||||
Sbjct: 337 cagtgctctggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccac 396

                                                          
Query: 172 ttcatctccaccaacaacccgtacaccatgaacctccggttcatcgc 218
           |||||||||||||||||||| ||| ||||||||  | ||||||||||
Sbjct: 397 ttcatctccaccaacaacccctacgccatgaactacaggttcatcgc 443


>gnl|LJGI|TC59920 homologue to UniRef100_A2Q4I5 Cluster: Auxin Efflux Carrier; n=2;
           Medicago truncatula|Rep: Auxin Efflux Carrier - Medicago
           truncatula (Barrel medic), partial (34%)
          Length = 760

 Score =  101 bits (51), Expect = 8e-21
 Identities = 138/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 52  tacgtggctatgatcctagcgtacggctctgtccggtggtggaagattttctccccggac 111
           ||||||||||||||||| || |||||||| ||    |||||||| || |||   || |||
Sbjct: 222 tacgtggctatgatcctcgcctacggctcagtgaaatggtggaaaatcttcagtccagac 281

                                                                       
Query: 112 cagtgctccggcataaaccgtttcgtggcgatcttcgctgtgccgctgctctccttccac 171
           |||||||| ||||| |||||||| || ||  | ||||| || || ||||| |||||||||
Sbjct: 282 cagtgctctggcatcaaccgttttgttgctctgttcgcagttcctctgctttccttccac 341

                                                          
Query: 172 ttcatctccaccaacaacccgtacaccatgaacctccggttcatcgc 218
           |||||||||||||||||||| ||| ||||||||  | ||||||||||
Sbjct: 342 ttcatctccaccaacaacccctacgccatgaactacaggttcatcgc 388