Miyakogusa Predicted Gene
- Lj0g3v0177209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0177209.1 Non Chatacterized Hit- tr|F6GW54|F6GW54_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,68.75,2e-18,
,CUFF.11190.1
(360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67440 weakly similar to UniRef100_A7PQJ6 Cluster: Chr... 714 0.0
gnl|LJGI|TC79365 similar to UniRef100_A7PQJ6 Cluster: Chromosome... 266 8e-71
gnl|LJGI|DC592962 similar to UniRef100_A7PQJ6 Cluster: Chromosom... 232 1e-60
gnl|LJGI|FS325458 homologue to UniRef100_A7P7G9 Cluster: Chromos... 230 5e-60
gnl|LJGI|FS331365 similar to UniRef100_A7P7G9 Cluster: Chromosom... 230 5e-60
gnl|LJGI|BP066800 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin ... 139 1e-32
gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome... 137 5e-32
gnl|LJGI|BW596673 133 8e-31
gnl|LJGI|FS322630 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin ... 98 4e-20
gnl|LJGI|DC594447 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3... 98 4e-20
gnl|LJGI|TC60852 similar to UniRef100_Q40338 Cluster: Cyclin; n=... 98 4e-20
gnl|LJGI|TC70695 similar to UniRef100_Q2HZY0 Cluster: Endo-1,4-b... 94 7e-19
>gnl|LJGI|TC67440 weakly similar to UniRef100_A7PQJ6 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 607
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Plus
Query: 1 atgaggccggaatccaccgttggcgagctggtggcggcggtggcgcgacagtacgtgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atgaggccggaatccaccgttggcgagctggtggcggcggtggcgcgacagtacgtgaag 189
Query: 61 gaagttcgctgttctatcctgccaaccaacgatgcctctgatttcaaccttcattactcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaagttcgctgttctatcctgccaaccaacgatgcctctgatttcaaccttcattactcg 249
Query: 121 cagtttagcctagaaagtttgcatagggaggagaaactggtagaacttggctctaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagtttagcctagaaagtttgcatagggaggagaaactggtagaacttggctctaggaac 309
Query: 181 tttttcatgtgcccaaggttattttcagccgtttttcttcaatgttatgtggctgattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttttcatgtgcccaaggttattttcagccgtttttcttcaatgttatgtggctgattct 369
Query: 241 ctgtctctttcacagggattatatcgtgttttcattcaccattcttcactcaaaatgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgtctctttcacagggattatatcgtgttttcattcaccattcttcactcaaaatgagc 429
Query: 301 agctcaagggaaaactcgccagattggttatgttattttctgaaacatatggaaacataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agctcaagggaaaactcgccagattggttatgttattttctgaaacatatggaaacataa 489
>gnl|LJGI|TC79365 similar to UniRef100_A7PQJ6 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1388
Score = 266 bits (134), Expect = 8e-71
Identities = 179/194 (92%)
Strand = Plus / Plus
Query: 1 atgaggccggaatccaccgttggcgagctggtggcggcggtggcgcgacagtacgtgaag 60
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct: 509 atgaggccggaatccaccgtcggcgagctggtggcggcggtggcgcggcagtatgtgaag 568
Query: 61 gaagttcgctgttctatcctgccaaccaacgatgcctctgatttcaaccttcattactcg 120
|||| |||| || | |||||||| |||||||| ||||| |||||| ||||||||||||||
Sbjct: 569 gaagctcgccgtccgatcctgccgaccaacgacgcctccgatttcgaccttcattactcg 628
Query: 121 cagtttagcctagaaagtttgcatagggaggagaaactggtagaacttggctctaggaac 180
||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 629 cagtttagcctagaaagtttgcatagggaggagaagctagtagaacttgggtctaggaac 688
Query: 181 tttttcatgtgccc 194
|| |||||||||||
Sbjct: 689 ttcttcatgtgccc 702
>gnl|LJGI|DC592962 similar to UniRef100_A7PQJ6 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 595
Score = 232 bits (117), Expect = 1e-60
Identities = 172/189 (91%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 1 atgaggccggaatccaccgttggcgagctggtggcggcggtggcgcgacagtacgtgaag 60
|||||||||||||||||||| |||||| || |||||| ||||||||| ||||||||||||
Sbjct: 321 atgaggccggaatccaccgtcggcgagttgatggcggtggtggcgcggcagtacgtgaag 380
Query: 61 gaagttcgctgttctatcctgccaaccaacgatgcctctgatttcaaccttcattactcg 120
|||| |||| || | |||| | | |||||||||||||| ||||| ||||||||||||||
Sbjct: 381 gaagctcgccgtccgatccggtcgaccaacgatgcctcc-atttcgaccttcattactcg 439
Query: 121 cagtttagcctagaaagtttgcatagggaggagaaactggtagaacttggctctaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 tagtttagcctagaaagtttgcatagggaggagaaactggtagaacttgggtctaggaac 499
Query: 181 tttttcatg 189
|||||||||
Sbjct: 500 tttttcatg 508
>gnl|LJGI|FS325458 homologue to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 718
Score = 230 bits (116), Expect = 5e-60
Identities = 147/156 (94%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 205 tcagccgtttttcttcaatgttatgtggctgattctctgtctctttcacagggattatat 264
||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||
Sbjct: 302 tcagccgtttttcgtcaatgttatgtggctgattctctgtctctttcacagg-atcagat 360
Query: 265 cgtgttttcattcaccattcttcactcaaaatgagcagctcaagggaaaactcgccagat 324
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 cgtgttttcattcaccactcttcactcaaaatgagcagctcaagggaaaactcgctagat 420
Query: 325 tggttatgttattttctgaaacatatggaaacataa 360
||||| |||| |||||| ||||||||||||||||||
Sbjct: 421 tggttgtgttcttttctaaaacatatggaaacataa 456
>gnl|LJGI|FS331365 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 806
Score = 230 bits (116), Expect = 5e-60
Identities = 147/156 (94%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 205 tcagccgtttttcttcaatgttatgtggctgattctctgtctctttcacagggattatat 264
|||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||
Sbjct: 347 tcagccgtttttcttcaatgttatgtggctgattctctgtctctttcacagg-atcagat 405
Query: 265 cgtgttttcattcaccattcttcactcaaaatgagcagctcaagggaaaactcgccagat 324
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 406 cgtgttttcattcaccactcttcactcaaaatgagcagctcaatggaaaactcgctagat 465
Query: 325 tggttatgttattttctgaaacatatggaaacataa 360
||||| |||| |||||||||||||||||||| ||||
Sbjct: 466 tggttgtgttcttttctgaaacatatggaaatataa 501
>gnl|LJGI|BP066800 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(16%)
Length = 496
Score = 139 bits (70), Expect = 1e-32
Identities = 122/138 (88%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 1 atgaggccggaatccaccgttggcgagctggtggcggcggtggcgcgacagtacgtgaag 60
|||||||||||||||||||| |||||| || |||||| ||||||||| ||||||||||||
Sbjct: 176 atgaggccggaatccaccgtcggcgagttgatggcggtggtggcgcggcagtacgtgaag 235
Query: 61 gaagttcgctgttctatcctgccaaccaacgatgcctctgatttcaaccttcattactcg 120
|||| |||| || | |||| | | |||||||||||||| ||||| ||||||||||||||
Sbjct: 236 gaagctcgccgtccgatccggtcgaccaacgatgcctc-catttcgaccttcattactcg 294
Query: 121 cagtttagcctagaaagt 138
|||||||||||||||||
Sbjct: 295 tagtttagcctagaaagt 312
>gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1012
Score = 137 bits (69), Expect = 5e-32
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 253 cagggattatatcgtgttttcattcaccattcttcactcaaaatgagcagctcaagggaa 312
||||||| | ||| ||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 163 cagggatcagatcatgttttcattcaccactcttcactccaaatgagcagctcaagggaa 222
Query: 313 aactcgccagattggttatgttattttctgaaacata 349
||||||||||||||||| |||| ||||||||||||||
Sbjct: 223 aactcgccagattggttgtgttcttttctgaaacata 259
>gnl|LJGI|BW596673
Length = 511
Score = 133 bits (67), Expect = 8e-31
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 267 tgttttcattcaccattcttcactcaaaatgagcagctcaagggaaaactcgccagattg 326
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 401 tgttttcattcaccactcttcactccaaatgagcagctcaagggaaaactcgccagattg 460
Query: 327 gttatgttattttctgaaacata 349
||| |||| ||||||||||||||
Sbjct: 461 gttgtgttcttttctgaaacata 483
>gnl|LJGI|FS322630 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(18%)
Length = 646
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 86 ccaacgatgcctctgatttcaaccttcattactcgcagtttagcctagaaagt 138
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 377 ccaacgatgcctctgatttcgaccttcattactcgcagtttagcctagaaagt 429
>gnl|LJGI|DC594447 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(15%)
Length = 579
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 86 ccaacgatgcctctgatttcaaccttcattactcgcagtttagcctagaaagt 138
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 353 ccaacgatgcctctgatttcgaccttcattactcgcagtttagcctagaaagt 405
>gnl|LJGI|TC60852 similar to UniRef100_Q40338 Cluster: Cyclin; n=1; Medicago
sativa|Rep: Cyclin - Medicago sativa (Alfalfa), partial
(47%)
Length = 1364
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 86 ccaacgatgcctctgatttcaaccttcattactcgcagtttagcctagaaagt 138
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 305 ccaacgatgcctctgatttcgaccttcattactcgcagtttagcctagaaagt 357
>gnl|LJGI|TC70695 similar to UniRef100_Q2HZY0 Cluster: Endo-1,4-beta-glucanase; n=1;
Glycine max|Rep: Endo-1,4-beta-glucanase - Glycine max
(Soybean), partial (16%)
Length = 697
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 197 ggttattttcagccgtttttcttcaatgttatgtggctgattctctgtctctttcacag 255
|||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 288 ggttcttttcagccgttttccttcaatgttctgtggctgattctctgtctctttcacag 346