Miyakogusa Predicted Gene
- Lj0g3v0176879.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0176879.1 Non Chatacterized Hit- tr|I1ND60|I1ND60_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25612
PE,75.55,0,seg,NULL; ARATH130DUF,Protein of unknown function DUF1423,
plant; SUBFAMILY NOT NAMED,NULL; VERNALIZ,CUFF.11168.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77012 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 321 5e-87
gnl|LJGI|GO012748 similar to UniRef100_A7P3Z4 Cluster: Chromosom... 287 7e-77
gnl|LJGI|TC65507 similar to UniRef100_A7P3Z4 Cluster: Chromosome... 62 8e-09
>gnl|LJGI|TC77012 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 670
Score = 321 bits (162), Expect = 5e-87
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 916 aagtcaaatgatctccatcagaaagacttcaaagcctcaatgtcaagtggactgaaaaat 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcaaatgatctccatcagaaagacttcaaagcctcaatgtcaagtggactgaaaaat 60
Query: 976 gagactgattttgacttggatgatttgttaaggaaaggtgggcttgaaagcttggagagc 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagactgattttgacttggatgatttgttaaggaaaggtgggcttgaaagcttggagagc 120
Query: 1036 attgtgaggataaaggaggcagaagccagaatgttccagacc 1077
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgtgaggataaaggaggcagaagccagaatgttccagacc 162
>gnl|LJGI|GO012748 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 331
Score = 287 bits (145), Expect = 7e-77
Identities = 241/273 (88%)
Strand = Plus / Plus
Query: 238 tctgacatggtggaggttttcttgtttatgagatgtagaaacttgaactgcaagagcttg 297
||||| ||||||||| ||||||||| || |||||||| ||| ||| ||||||| ||||
Sbjct: 59 tctgagatggtggagattttcttgtataggagatgtataaatgtgacctgcaagcacttg 118
Query: 298 cttcctgttgatgactgtgactgcaagatttgctctggaaataagggattttgcagttct 357
||||||||||||||||||||||||||||||||||| || || || || |||||||| |||
Sbjct: 119 cttcctgttgatgactgtgactgcaagatttgctcagggaacaaagggttttgcagctct 178
Query: 358 tgcatgtgtcctgtttgtttgagctttgattgtgcaagtaatacttgtagttgggttggt 417
|||||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||
Sbjct: 179 tgcatgtgtcctgtttgtttgaactttgattgtgcaagcaacacttgtagttggattggt 238
Query: 418 tgtgatgtttgttcccactggtgtcatgctgcctgtgccattgagaggaatctaatcaaa 477
|||||||||||||| |||||||| |||||||| |||| ||| ||||||| || |||||
Sbjct: 239 tgtgatgtttgttctcactggtgccatgctgcttgtggtattcagaggaacctcatcaag 298
Query: 478 cccgggccaagcttgaagggtccttcagggacc 510
|| ||||| ||||||||||| ||||||||||||
Sbjct: 299 cctgggcctagcttgaaggggccttcagggacc 331
>gnl|LJGI|TC65507 similar to UniRef100_A7P3Z4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 719
Score = 61.9 bits (31), Expect = 8e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 1027 ttggagagcattgtgaggataaaggaggcagaagccagaatgttcca 1073
||||||||||| ||| ||||||||||||| ||||||| |||||||||
Sbjct: 270 ttggagagcatcgtgcggataaaggaggccgaagccaaaatgttcca 316
Score = 52.0 bits (26), Expect = 7e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 803 cttctggtatatcttcaaaggatttgtcagcatctcaggctaacct 848
|||||||||| || |||||||||||| |||| ||||| ||||||||
Sbjct: 22 cttctggtatttcctcaaaggatttgacagcctctcaagctaacct 67