Miyakogusa Predicted Gene

Lj0g3v0175939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0175939.1 CUFF.11083.1
         (355 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68126                                                      474   e-133

>gnl|LJGI|TC68126 
          Length = 1007

 Score =  474 bits (239), Expect = e-133
 Identities = 242/243 (99%)
 Strand = Plus / Plus

                                                                       
Query: 113 tctcaagcttcattggccaatgttacgatgctgattctctgacaaaatttcgaattttca 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcaagcttcattggccaatgttacgatgctgattctctgacaaaatttcgaattttca 500

                                                                       
Query: 173 ttttcgtagctgcaatcgtgttgtctctggctggttgggcggtagtctttatacatggtg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 ttttcgtagctgcaatcgtgttgtctctggctggttgggcggtagtctttatacacggtg 560

                                                                       
Query: 233 cttcaaaggttacggaaactaatttctgtaagttctgctttttcactggtttgtcaactt 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcaaaggttacggaaactaatttctgtaagttctgctttttcactggtttgtcaactt 620

                                                                       
Query: 293 ttggtcagtttgccttcgctttctttgtggaatatatcttccgcaagctgtacaggatgt 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggtcagtttgccttcgctttctttgtggaatatatcttccgcaagctgtacaggatgt 680

              
Query: 353 agt 355
           |||
Sbjct: 681 agt 683



 Score =  131 bits (66), Expect = 3e-30
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctatgaaaaagctcacataccacattatcaccttcaataatatagtcgcatttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atggctatgaaaaagctcacataccacattatcaccttcaataatatagtcgcatttcca 438

                 
Query: 61  attctc 66
           ||||||
Sbjct: 439 attctc 444