Miyakogusa Predicted Gene

Lj0g3v0175129.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0175129.1 Non Chatacterized Hit- tr|A5BUE3|A5BUE3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54,0.000003,BULB_LECTIN,Bulb-type lectin domain;
alpha-D-mannose-specific plant lectins,Bulb-type lectin
domain;,CUFF.11010.1
         (495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-...   438   e-122
gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Ch...    68   6e-11
gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Ch...    54   8e-07

>gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-locus receptor kinase
           precursor; n=2; Brassica napus|Rep: S-locus receptor
           kinase precursor - Brassica napus var. napus, partial
           (14%)
          Length = 744

 Score =  438 bits (221), Expect = e-122
 Identities = 417/486 (85%), Gaps = 9/486 (1%)
 Strand = Plus / Plus

                                                                       
Query: 18  tatgcttgttatttccatgcttctattgttcctctctccattttcctctgcaaaagatac 77
           ||||||| |||||||||  || ||||||||  |||||| |||  | | ||||| ||| ||
Sbjct: 148 tatgcttcttatttccaacctactattgttgttctctcaattcacgtttgcaacagacac 207

                                                                       
Query: 78  cattacaaaccttgagtcacttcctgatgatggcaccaccttggtttctaaagatggaac 137
           |||||| |||||||| ||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 208 cattaccaaccttgactcacttcctgatgatggaaccaccttggtttcaaacgatggaac 267

                                                                       
Query: 138 ctttgagttgggtttcttcaaccccggtagttcctcgaatcgctatgtaggaatctggta 197
           ||||||| ||||||||||||| || || || ||||| || ||||||||||||||||||||
Sbjct: 268 ctttgagctgggtttcttcaatccaggcagctcctcaaaccgctatgtaggaatctggta 327

                                                                       
Query: 198 caaaatcatctcagttaggacagttgtttgggttgccaaccgtgacaatccaatcaaagg 257
           ||| | ||||  |||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 328 caagaacatccaagttagaacagttgtttgggttgccaaccgtgacaatccaatcaaaga 387

                                                                       
Query: 258 caactccagccagctgatcataaaccaagatggaaaccttgtgcttatcaacaaaaacaa 317
           |||||||||| || ||||||||| |||||||||||||||||| ||| |||||||||||||
Sbjct: 388 caactccagcaagttgatcataagccaagatggaaaccttgtacttctcaacaaaaacaa 447

                                                                       
Query: 318 ctcaattctctggtcaacaaatgcaaccactaaggcggcgagtccagttgcgcagctctt 377
           |||||||||||||||||||||  ||||  | |||||||||||||| |||||||||| |||
Sbjct: 448 ctcaattctctggtcaacaaacacaactgcgaaggcggcgagtcccgttgcgcagccctt 507

                                                                       
Query: 378 agacactggaaacttagtaattagagaagag---------aacaacaacaatgaagaann 428
           |||||||||||| ||| || | ||||| |||         |||| |||||||||||||  
Sbjct: 508 agacactggaaatttaatagtcagagatgagaaagacaacaacagcaacaatgaagaaag 567

                                                                       
Query: 429 nnnnncgtggcagagctttgatcatccttgtgatacagtgttaccaggaatgaagattgg 488
                  |||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 568 tttcttatggcagagctttgatcatccttgtgatacactgttaccaggtatgaagattgg 627

                 
Query: 489 atggga 494
           ||||||
Sbjct: 628 atggga 633


>gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 764

 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                     
Query: 435 gtggcagagctttgatcatccttgtgatacagtgttaccaggaatgaagattggatgg 492
           |||||||||||||||| |||||||||||||  |  || ||||||||||||||||||||
Sbjct: 443 gtggcagagctttgattatccttgtgatacttttctagcaggaatgaagattggatgg 500



 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 185 taggaatctggtacaaaatcatctcagttaggacagttgtttgggttgccaaccgtga 242
           ||||||| ||||||||||  ||  ||||||  || |||||||||||||||||||||||
Sbjct: 187 taggaatatggtacaaaaagattccagttacaactgttgtttgggttgccaaccgtga 244


>gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 729

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 436 tggcagagctttgatcatccttgtgatacagtgttaccaggaatgaa 482
           ||||||||||||||  | |||||||| ||| ||||||||||||||||
Sbjct: 479 tggcagagctttgactacccttgtgacacactgttaccaggaatgaa 525