Miyakogusa Predicted Gene
- Lj0g3v0175129.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0175129.1 Non Chatacterized Hit- tr|A5BUE3|A5BUE3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,54,0.000003,BULB_LECTIN,Bulb-type lectin domain;
alpha-D-mannose-specific plant lectins,Bulb-type lectin
domain;,CUFF.11010.1
(495 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-... 438 e-122
gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Ch... 68 6e-11
gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Ch... 54 8e-07
>gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-locus receptor kinase
precursor; n=2; Brassica napus|Rep: S-locus receptor
kinase precursor - Brassica napus var. napus, partial
(14%)
Length = 744
Score = 438 bits (221), Expect = e-122
Identities = 417/486 (85%), Gaps = 9/486 (1%)
Strand = Plus / Plus
Query: 18 tatgcttgttatttccatgcttctattgttcctctctccattttcctctgcaaaagatac 77
||||||| ||||||||| || |||||||| |||||| ||| | | ||||| ||| ||
Sbjct: 148 tatgcttcttatttccaacctactattgttgttctctcaattcacgtttgcaacagacac 207
Query: 78 cattacaaaccttgagtcacttcctgatgatggcaccaccttggtttctaaagatggaac 137
|||||| |||||||| ||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 208 cattaccaaccttgactcacttcctgatgatggaaccaccttggtttcaaacgatggaac 267
Query: 138 ctttgagttgggtttcttcaaccccggtagttcctcgaatcgctatgtaggaatctggta 197
||||||| ||||||||||||| || || || ||||| || ||||||||||||||||||||
Sbjct: 268 ctttgagctgggtttcttcaatccaggcagctcctcaaaccgctatgtaggaatctggta 327
Query: 198 caaaatcatctcagttaggacagttgtttgggttgccaaccgtgacaatccaatcaaagg 257
||| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caagaacatccaagttagaacagttgtttgggttgccaaccgtgacaatccaatcaaaga 387
Query: 258 caactccagccagctgatcataaaccaagatggaaaccttgtgcttatcaacaaaaacaa 317
|||||||||| || ||||||||| |||||||||||||||||| ||| |||||||||||||
Sbjct: 388 caactccagcaagttgatcataagccaagatggaaaccttgtacttctcaacaaaaacaa 447
Query: 318 ctcaattctctggtcaacaaatgcaaccactaaggcggcgagtccagttgcgcagctctt 377
||||||||||||||||||||| |||| | |||||||||||||| |||||||||| |||
Sbjct: 448 ctcaattctctggtcaacaaacacaactgcgaaggcggcgagtcccgttgcgcagccctt 507
Query: 378 agacactggaaacttagtaattagagaagag---------aacaacaacaatgaagaann 428
|||||||||||| ||| || | ||||| ||| |||| |||||||||||||
Sbjct: 508 agacactggaaatttaatagtcagagatgagaaagacaacaacagcaacaatgaagaaag 567
Query: 429 nnnnncgtggcagagctttgatcatccttgtgatacagtgttaccaggaatgaagattgg 488
|||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 568 tttcttatggcagagctttgatcatccttgtgatacactgttaccaggtatgaagattgg 627
Query: 489 atggga 494
||||||
Sbjct: 628 atggga 633
>gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 764
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 435 gtggcagagctttgatcatccttgtgatacagtgttaccaggaatgaagattggatgg 492
|||||||||||||||| ||||||||||||| | || ||||||||||||||||||||
Sbjct: 443 gtggcagagctttgattatccttgtgatacttttctagcaggaatgaagattggatgg 500
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 185 taggaatctggtacaaaatcatctcagttaggacagttgtttgggttgccaaccgtga 242
||||||| |||||||||| || |||||| || |||||||||||||||||||||||
Sbjct: 187 taggaatatggtacaaaaagattccagttacaactgttgtttgggttgccaaccgtga 244
>gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 729
Score = 54.0 bits (27), Expect = 8e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 436 tggcagagctttgatcatccttgtgatacagtgttaccaggaatgaa 482
|||||||||||||| | |||||||| ||| ||||||||||||||||
Sbjct: 479 tggcagagctttgactacccttgtgacacactgttaccaggaatgaa 525