Miyakogusa Predicted Gene
- Lj0g3v0174019.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0174019.1 tr|O82460|O82460_LOTJA Rac GTPase activating
protein 3 (Fragment) OS=Lotus japonicus PE=2 SV=1,97.92,0,GTPASE
ACTIVATING PROTEIN,NULL; MKIAA1688 PROTEIN,NULL; seg,NULL; RHOGAP,Rho
GTPase-activating prote,CUFF.11433.1
(1377 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57167 UniRef100_O82460 Cluster: Rac GTPase activating... 2674 0.0
gnl|LJGI|TC76589 similar to UniRef100_O82460 Cluster: Rac GTPase... 466 e-130
gnl|LJGI|TC71983 similar to UniRef100_O82460 Cluster: Rac GTPase... 355 5e-97
gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase... 210 2e-53
gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating... 54 2e-06
gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome... 52 9e-06
gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating... 52 9e-06
>gnl|LJGI|TC57167 UniRef100_O82460 Cluster: Rac GTPase activating protein 3; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 3 - Lotus
japonicus, complete
Length = 1805
Score = 2674 bits (1349), Expect = 0.0
Identities = 1370/1377 (99%)
Strand = Plus / Plus
Query: 1 atgacagggccagtgatggtgacaaggggtggaggatgcggtggtgggaagggaaggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgacagggccagtgatggtgacaaggggtggaggatgcggtggtgggaagggaaggaga 147
Query: 61 ggaggcagagacgccgtcgaagaagcagagcagaaccaggggtcgccggcggcgttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggaggcagagacgccgtcgaagaagcagagcagaaccaggggtcgccggcggcgttttta 207
Query: 121 ttggcgggtctgaagaaatctatggtggggtggcgtgtcgacagtcctgctgatgtcatc 180
||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 208 ttggcggctctgaagaaatctatggtggcgtgcagtgtcgacagtcctgatgatgtcatc 267
Query: 181 tccgccgtgcatcccatggagattggttggcctaccaacgttaagcacgtcactctcgtc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 268 tccgccgtgcatcccatggagattggatggcctaccaacgttaagcacgtcactcacgtc 327
Query: 241 accttcgatcgcttcaatggcttcctgggtcttcctcttgagttagaggttcatgtacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 accttcgatcgcttcaatggcttcctgggtcttcctcttgagttagaggttcatgtacct 387
Query: 301 gctcctgttcccagtgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gctcctgttcccagtgctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgt 447
Query: 361 tcttatgattcaaagggaaacagtgtccccactattctgctgctaatgcaggagcggtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcttatgattcaaagggaaacagtgtccccactattctgctgctaatgcaggagcggtta 507
Query: 421 tactcacaggggggccttatggctgaaggtatattccgcataaacccggagaacggtcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tactcacaggggggccttatggctgaaggtatattccgcataaacccggagaacggtcaa 567
Query: 481 gaggagcatttgagggaccagttgaataggggcgttgtgccggataacattgatgtccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaggagcatttgagggaccagttgaataggggcgttgtgccggataacattgatgtccat 627
Query: 541 tgcttggcagggctaattaaagcatggttcagagagcttccttctggagtgcttgatgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgcttggcagggctaattaaagcatggttcagagagcttccttctggagtgcttgatgga 687
Query: 601 ctttctcctgaacaagttcttgagtgcaacacagaagaagaatttgttcagcttgtgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctttctcctgaacaagttcttgagtgcaacacagaagaagaatttgttcagcttgtgaag 747
Query: 661 cagctcaagccaactgagttagccttacttaactgggctcttgatctcatggctgatgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cagctcaagccaactgagttagccttacttaactgggctcttgatctcatggctgatgtt 807
Query: 721 gtggaagaagaggagcataacaaaatggatgctaggaatatagcaatggtttttgctcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gtggaagaagaggagcataacaaaatggatgctaggaatatagcaatggtttttgctcca 867
Query: 781 aatatgactcagatgtctgatccactaactgctctgatgcacgcggtccaagtaatgaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 aatatgactcagatgtctgatccactaactgctctgatgcacgcggtccaagtaatgaat 927
Query: 841 ttactgaagaccctgatactgaagacacttagtgaacgtgaagaagcaacaacagcaggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ttactgaagaccctgatactgaagacacttagtgaacgtgaagaagcaacaacagcaggg 987
Query: 901 tattcatccatgtcatctcattcatcagatcgccaatctgaggatgaatatgatagtcag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 tattcatccatgtcatctcattcatcagatcgccaatctgaggatgaatatgatagtcag 1047
Query: 961 cttgaaatgtataccagtgctgaattgagagggagccagtcagattgtgatgatcatgtt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 cttgaaatgtataccagtgctgaattgagagggagccagtcagattgtgatgatcatgtt 1107
Query: 1021 aacaataatagccttaacagtgaagaggaagtggattctgcgtctgtaagtgagatagag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 aacaataatagccttaacagtgaagaggaagtggattctgcgtctgtaagtgagatagag 1167
Query: 1081 gaatgcttcttgaagcagttgaatgagaacaaacaaggaggattcgcagaggaacctgca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 gaatgcttcttgaagcagttgaatgagaacaaacaaggaggattcgcagaggaacctgca 1227
Query: 1141 aggagtacttgctctggctataacctggaatctgctgtatcatttaccgatgcgaaacct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 aggagtacttgctctggctataacctggaatctgctgtatcatttaccgatgcgaaacct 1287
Query: 1201 gataattcgtgctcaagttcttatgaagatgactcgggagcaactctgtcggctgaggga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gataattcgtgctcaagttcttatgaagatgactcgggagcaactctgtcggctgaggga 1347
Query: 1261 tcgagtgcggaatcaagtagtccatcaattggaagtacatactgcaccaatgatgtggaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 tcgagtgcggaatcaagtagtccatcaattggaagtacatactgcaccaatgatgtggaa 1407
Query: 1321 atgatggataagtttgcagattgtgtttcactagtgccactgtttgcatcaagttaa 1377
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 atgatggataagtttgcagattgtgtttcactagtgccactgtttgcatcaagttaa 1464
>gnl|LJGI|TC76589 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (50%)
Length = 913
Score = 466 bits (235), Expect = e-130
Identities = 463/539 (85%)
Strand = Plus / Plus
Query: 196 atggagattggttggcctaccaacgttaagcacgtcactctcgtcaccttcgatcgcttc 255
|||||||| || ||||||||| ||||| ||||| |||||| ||||||||||||||||||
Sbjct: 370 atggagatcggatggcctaccgacgttcagcacatcactcatgtcaccttcgatcgcttc 429
Query: 256 aatggcttcctgggtcttcctcttgagttagaggttcatgtacctgctcctgttcccagt 315
||||||||||||||||||||| ||||||| |||||| | | || | || |||||||||
Sbjct: 430 aatggcttcctgggtcttcctgttgagtttgaggttgagatcccgggtcgggttcccagt 489
Query: 316 gctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgttcttatgattcaaag 375
|||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 490 gctagtgtaagtgtatttggcgtctctgcagaatctatgcagtgttcttatgattcaaaa 549
Query: 376 ggaaacagtgtccccactattctgctgctaatgcaggagcggttatactcacaggggggc 435
|| ||||||||||| || ||||| | ||||||||||| || |||||||| ||||| |||
Sbjct: 550 gggaacagtgtccctacaattctcttactaatgcaggaacgtttatactcccagggaggc 609
Query: 436 cttatggctgaaggtatattccgcataaacccggagaacggtcaagaggagcatttgagg 495
| | ||||||||| ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 610 ttaaaggctgaaggaatatttcgcataaacccagaaaatagtcaagaggagcatgtgagg 669
Query: 496 gaccagttgaataggggcgttgtgccggataacattgatgtccattgcttggcagggcta 555
||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||| || |||
Sbjct: 670 aaccagttgaatagaggcattgtgccagatgacattgatgtccactgcttggcgggacta 729
Query: 556 attaaagcatggttcagagagcttccttctggagtgcttgatggactttctcctgaacaa 615
|||||||| |||||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 730 attaaagcctggttccgagagcttcctcaaggagtgctggatggactttcccctgaacaa 789
Query: 616 gttcttgagtgcaacacagaagaagaatttgttcagcttgtgaagcagctcaagccaact 675
||||| |||| ||||| |||||||||| | | |||||||||||||||| ||||||||
Sbjct: 790 gttctgcagtgtaacaccgaagaagaatctatcgagcttgtgaagcagctgaagccaacc 849
Query: 676 gagttagccttacttaactgggctcttgatctcatggctgatgttgtggaagaagagga 734
||| |||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||
Sbjct: 850 gagactgccttactcaactgggctattgatctcatggccgatgttgtagaagatgagga 908
>gnl|LJGI|TC71983 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (39%)
Length = 714
Score = 355 bits (179), Expect = 5e-97
Identities = 350/407 (85%)
Strand = Plus / Plus
Query: 196 atggagattggttggcctaccaacgttaagcacgtcactctcgtcaccttcgatcgcttc 255
|||||||| || ||||||||| ||||| ||||| |||||| ||||||||||||||||||
Sbjct: 308 atggagatcggatggcctaccgacgttcagcacatcactcatgtcaccttcgatcgcttc 367
Query: 256 aatggcttcctgggtcttcctcttgagttagaggttcatgtacctgctcctgttcccagt 315
||||||||||||||||||||| ||||||| |||||| | | || | || |||||||||
Sbjct: 368 aatggcttcctgggtcttcctgttgagtttgaggttgagatcccgggtcgggttcccagt 427
Query: 316 gctagtgttagtgtgtttggcgtctcagctgaatcaatgcagtgttcttatgattcaaag 375
|||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 428 gctagtgtaagtgtatttggcgtctctgcagaatctatgcagtgttcttatgattcaaaa 487
Query: 376 ggaaacagtgtccccactattctgctgctaatgcaggagcggttatactcacaggggggc 435
|| ||||||||||| || ||||| | ||||||||||| || |||||||| ||||| |||
Sbjct: 488 gggaacagtgtccctacaattctcttactaatgcaggaacgtttatactcccagggaggc 547
Query: 436 cttatggctgaaggtatattccgcataaacccggagaacggtcaagaggagcatttgagg 495
| | ||||||||| ||||| ||||||||||| || || |||||||||||||| |||||
Sbjct: 548 ttaaaggctgaaggaatatttcgcataaacccagaaaatagtcaagaggagcatgtgagg 607
Query: 496 gaccagttgaataggggcgttgtgccggataacattgatgtccattgcttggcagggcta 555
||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||| || |||
Sbjct: 608 aaccagttgaatagaggcattgtgccagatgacattgatgtccactgcttggcgggacta 667
Query: 556 attaaagcatggttcagagagcttccttctggagtgcttgatggact 602
|||||||| |||||| ||||||||||| |||||||| ||||||||
Sbjct: 668 attaaagcctggttccgagagcttcctcaaggagtgctggatggact 714
>gnl|LJGI|TC78169 similar to UniRef100_O82460 Cluster: Rac GTPase activating protein
3; n=1; Lotus japonicus|Rep: Rac GTPase activating
protein 3 - Lotus japonicus, partial (23%)
Length = 797
Score = 210 bits (106), Expect = 2e-53
Identities = 217/254 (85%)
Strand = Plus / Plus
Query: 708 catggctgatgttgtggaagaagaggagcataacaaaatggatgctaggaatatagcaat 767
|||||| |||||||| ||||| ||||| |||||||||| | || || || || |||||
Sbjct: 1 catggccgatgttgtagaagatgaggaatgtaacaaaatgaacgcaagaaacattgcaat 60
Query: 768 ggtttttgctccaaatatgactcagatgtctgatccactaactgctctgatgcacgcggt 827
||||||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct: 61 ggtttttgctccaaacatgactcagatgtctgatcctctaaccgccctgatgcatgcggt 120
Query: 828 ccaagtaatgaatttactgaagaccctgatactgaagacacttagtgaacgtgaagaagc 887
||||| ||||| ||||| ||||| ||||| ||||||||||||| |||||||||||| |
Sbjct: 121 tcaagtgatgaacttactcaagacattgataatgaagacacttagagaacgtgaagaaac 180
Query: 888 aacaacagcagggtattcatccatgtcatctcattcatcagatcgccaatctgaggatga 947
| |||||| || |||||| ||||||| | ||||||||||||||||| ||||||| |||
Sbjct: 181 agcaacaggtggatattcacccatgtcctttcattcatcagatcgccggtctgaggctga 240
Query: 948 atatgatagtcagc 961
|||||| |||||||
Sbjct: 241 atatgacagtcagc 254
Score = 52.0 bits (26), Expect = 9e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1304 gcaccaatgatgtggaaatgatggataagtttgcagattgtgtttcactagtgccactgt 1363
||||||| || ||||| ||||||||||| ||| |||||| ||| ||| |||||| |||
Sbjct: 564 gcaccaaagaagtggagatgatggataaatttacagattcggttccaccagtgccgctgg 623
Query: 1364 ttgcatcaagttaa 1377
||||||| ||||||
Sbjct: 624 ttgcatctagttaa 637
>gnl|LJGI|TC58702 UniRef100_O82458 Cluster: Rac GTPase activating protein 1; n=1; Lotus
japonicus|Rep: Rac GTPase activating protein 1 - Lotus
japonicus, complete
Length = 2109
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 757 aatatagcaatggtttttgctccaaatatgactcagatgtctgatccactaactgctctg 816
||||| |||||||||||||| ||||| |||||||| ||| | ||||| | |||||| ||
Sbjct: 1097 aatattgcaatggtttttgcaccaaacatgactcatatggccgatcctttgactgctttg 1156
Query: 817 atgcacgcggtccaagtaatgaatttactgaagac 851
||| | || || ||||| |||||||| || |||||
Sbjct: 1157 atgtatgcagtacaagtcatgaattttctcaagac 1191
>gnl|LJGI|TC68892 similar to UniRef100_A7PPC2 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1002
Score = 52.0 bits (26), Expect = 9e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 766 atggtttttgctccaaatatgactcagatg 795
||||||||||| ||||||||||||||||||
Sbjct: 243 atggtttttgcaccaaatatgactcagatg 272
>gnl|LJGI|TC65150 UniRef100_O82459 Cluster: Rac GTPase activating protein 2; n=1;
Lotus japonicus|Rep: Rac GTPase activating protein 2 -
Lotus japonicus, complete
Length = 1998
Score = 52.0 bits (26), Expect = 9e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 349 tcaatgcagtgttcttatgattcaaagggaaacagtgtccccactattctgctg 402
||||||||||| ||||||||| || ||| ||||||||||| || |||||||||
Sbjct: 763 tcaatgcagtgctcttatgatgaaagggggaacagtgtcccaaccattctgctg 816