Miyakogusa Predicted Gene
- Lj0g3v0173989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0173989.1 Non Chatacterized Hit- tr|F7DS91|F7DS91_ORNAN
Uncharacterized protein (Fragment) OS=Ornithorhynchus
,39.76,0.0000000000006,RNA-binding domain, RBD,NULL; no
description,Nucleotide-binding, alpha-beta plait; RRM_1,RNA
recogni,NODE_30547_length_1349_cov_53.416603.path2.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76132 similar to UniRef100_Q0DIP2 Cluster: Os05g03734... 547 e-155
gnl|LJGI|TC75302 homologue to UniRef100_A7PU04 Cluster: Chromoso... 446 e-124
>gnl|LJGI|TC76132 similar to UniRef100_Q0DIP2 Cluster: Os05g0373400 protein; n=1;
Oryza sativa Japonica Group|Rep: Os05g0373400 protein -
Oryza sativa subsp. japonica (Rice), partial (17%)
Length = 482
Score = 547 bits (276), Expect = e-155
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 700 ggtccacctggtgccaatctatttatttatcacatacctcaagaattcggagatcaagat 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtccacctggtgccaatctatttatttatcacatacctcaagaattcggagatcaagat 60
Query: 760 cttgccaatgcttttcaaccatttggtagagttataagcgctaaagtttttgttgataaa 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgccaatgcttttcaaccatttggtagagttataagcgctaaagtttttgttgataaa 120
Query: 820 gcaaccggtgttagtaaatgttttgggtttgttagctatgattcaccagaagctgctcaa 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaccggtgttagtaaatgttttgggtttgttagctatgattcaccagaagctgctcaa 180
Query: 880 tccgccattagtatgatgaatggatatcaactaggaggtaagaaattaaaggttcaacat 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgccattagtatgatgaatggatatcaactaggaggtaagaaattaaaggttcaacat 240
Query: 940 aagagggacaacaaaccgggtaaaccttactgatga 975
||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagagggacaacaaaccgggtaaaccttactgatga 276
>gnl|LJGI|TC75302 homologue to UniRef100_A7PU04 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 693
Score = 446 bits (225), Expect = e-124
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 1 atgcttccaaaaaatgtttctgaagttgaagtatccgcacttttctccaattatggaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atgcttccaaaaaatgtttctgaagttgaagtatccgcacttttctccaattatggaact 528
Query: 61 ataaaagatttacagattttaagaggttctcagcaaacaagtaaaggttgtgcatttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ataaaagatttacagattttaagaggttctcagcaaacaagtaaaggttgtgcatttttg 588
Query: 121 aagtatgaaaccaaagatcaggctcttgctgctttggaggcaatcaatggaaagcataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aagtatgaaaccaaagatcaggctcttgctgctttggaggcaatcaatggaaagcataaa 648
Query: 181 atggagggatctagtgttcctttagttgtaaaatgggctgatact 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 atggagggatctagtgttcctttagttgtaaaatgggctgatact 693