Miyakogusa Predicted Gene
- Lj0g3v0173889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0173889.1 Non Chatacterized Hit- tr|K3Y5S7|K3Y5S7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009566,28.37,2e-17,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; zf-RING_2,Zinc
fin,CUFF.10924.1
(2238 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69484 similar to UniRef100_Q00M69 Cluster: Zinc finge... 1118 0.0
gnl|LJGI|BP078791 similar to UniRef100_Q00M69 Cluster: Zinc fing... 906 0.0
gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc fing... 839 0.0
gnl|LJGI|TC81348 similar to UniRef100_Q00M69 Cluster: Zinc finge... 176 4e-43
gnl|LJGI|FS324032 similar to UniRef100_Q00M69 Cluster: Zinc fing... 159 9e-38
gnl|LJGI|TC70587 homologue to UniRef100_Q00M83 Cluster: Zinc fin... 100 7e-20
gnl|LJGI|TC66286 similar to UniRef100_Q00M69 Cluster: Zinc finge... 90 7e-17
gnl|LJGI|TC61339 similar to UniRef100_A7P9L8 Cluster: Chromosome... 86 1e-15
gnl|LJGI|BP082319 76 1e-12
>gnl|LJGI|TC69484 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (22%)
Length = 802
Score = 1118 bits (564), Expect = 0.0
Identities = 564/564 (100%)
Strand = Plus / Plus
Query: 1675 gaatcaaggggaccgtcatctggggttaacccaggagcagcttcatggttggagaggtca 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gaatcaaggggaccgtcatctggggttaacccaggagcagcttcatggttggagaggtca 65
Query: 1735 gctgatagtgagtttggaattccccaatccttacgatctttggctgttgccggtgaagga 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gctgatagtgagtttggaattccccaatccttacgatctttggctgttgccggtgaagga 125
Query: 1795 ggcaatagacttgtatctgagctccgcaatgtattgggcctcatgcgtaggggtgggaac 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ggcaatagacttgtatctgagctccgcaatgtattgggcctcatgcgtaggggtgggaac 185
Query: 1855 ctgcgacttgaggatgttatgatcctcgaccagtcaatgtttgctggaattgctaatatt 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctgcgacttgaggatgttatgatcctcgaccagtcaatgtttgctggaattgctaatatt 245
Query: 1915 catgaccgacacagggatatgcgacttgatgtcgataacatgtcttatgaggaattattg 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 catgaccgacacagggatatgcgacttgatgtcgataacatgtcttatgaggaattattg 305
Query: 1975 gctctggaagaacgcattggaaatgtgaatactggattgactgaggagaccataatgaaa 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gctctggaagaacgcattggaaatgtgaatactggattgactgaggagaccataatgaaa 365
Query: 2035 cttctgaaacagaagaaatattcggctgaaccaggatctcagggtgatgcagaaccctgc 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cttctgaaacagaagaaatattcggctgaaccaggatctcagggtgatgcagaaccctgc 425
Query: 2095 tgtgtttgtcaggaggagtacaatgatggagatgatatcggatcgctcaattgcgggcat 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgtgtttgtcaggaggagtacaatgatggagatgatatcggatcgctcaattgcgggcat 485
Query: 2155 ttttaccatactgggtgtattaaacagtggctaatgcataagaacctgtgtcccatttgt 2214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttttaccatactgggtgtattaaacagtggctaatgcataagaacctgtgtcccatttgt 545
Query: 2215 aagacaacagggttggcaaaatga 2238
||||||||||||||||||||||||
Sbjct: 546 aagacaacagggttggcaaaatga 569
>gnl|LJGI|BP078791 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (10%)
Length = 493
Score = 906 bits (457), Expect = 0.0
Identities = 457/457 (100%)
Strand = Plus / Plus
Query: 1323 aagcattcctggaaatgttgctccttcaagcattcctggaaatgttgcttcttcaagtat 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 aagcattcctggaaatgttgctccttcaagcattcctggaaatgttgcttcttcaagtat 96
Query: 1383 tcctggaaacattgctcctgcaagaattcctggaaacattgctcctgcaagtgttcctgg 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tcctggaaacattgctcctgcaagaattcctggaaacattgctcctgcaagtgttcctgg 156
Query: 1443 aaatgttgctccttcaagtattcctggaaacgttgctccttcattgcggactggtttaaa 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aaatgttgctccttcaagtattcctggaaacgttgctccttcattgcggactggtttaaa 216
Query: 1503 ttcaactattaattcatcagctgcctcggcttgggtttctcgtcccaatcctcagcagta 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttcaactattaattcatcagctgcctcggcttgggtttctcgtcccaatcctcagcagta 276
Query: 1563 tcctcgtaggttatctgaatatgttcgtcggtccttattttcccctggttctgaagctgc 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcctcgtaggttatctgaatatgttcgtcggtccttattttcccctggttctgaagctgc 336
Query: 1623 tggaagtccaagcaataactattcttctttgcatggtcctcctacttcatctgaatcaag 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tggaagtccaagcaataactattcttctttgcatggtcctcctacttcatctgaatcaag 396
Query: 1683 gggaccgtcatctggggttaacccaggagcagcttcatggttggagaggtcagctgatag 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gggaccgtcatctggggttaacccaggagcagcttcatggttggagaggtcagctgatag 456
Query: 1743 tgagtttggaattccccaatccttacgatctttggct 1779
|||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgagtttggaattccccaatccttacgatctttggct 493
Score = 230 bits (116), Expect = 3e-59
Identities = 158/172 (91%)
Strand = Plus / Plus
Query: 1314 tgcaaatgtaagcattcctggaaatgttgctccttcaagcattcctggaaatgttgcttc 1373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tgcaaatgtaagcattcctggaaatgttgctccttcaagcattcctggaaatgttgctcc 60
Query: 1374 ttcaagtattcctggaaacattgctcctgcaagaattcctggaaacattgctcctgcaag 1433
|||||| ||||||||||| ||||| || |||| ||||||||||||||||||||||||||
Sbjct: 61 ttcaagcattcctggaaatgttgcttcttcaagtattcctggaaacattgctcctgcaag 120
Query: 1434 tgttcctggaaatgttgctccttcaagtattcctggaaacgttgctccttca 1485
|||||||||| |||||||| ||||| |||||||||| ||||||||||||
Sbjct: 121 aattcctggaaacattgctcctgcaagtgttcctggaaatgttgctccttca 172
>gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (17%)
Length = 600
Score = 839 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Plus
Query: 1816 ctccgcaatgtattgggcctcatgcgtaggggtgggaacctgcgacttgaggatgttatg 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ctccgcaatgtattgggcctcatgcgtaggggtgggaacctgcgacttgaggatgttatg 229
Query: 1876 atcctcgaccagtcaatgtttgctggaattgctaatattcatgaccgacacagggatatg 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atcctcgaccagtcaatgtttgctggaattgctaatattcatgaccgacacagggatatg 289
Query: 1936 cgacttgatgtcgataacatgtcttatgaggaattattggctctggaagaacgcattgga 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cgacttgatgtcgataacatgtcttatgaggaattattggctctggaagaacgcattgga 349
Query: 1996 aatgtgaatactggattgactgaggagaccataatgaaacttctgaaacagaagaaatat 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aatgtgaatactggattgactgaggagaccataatgaaacttctgaaacagaagaaatat 409
Query: 2056 tcggctgaaccaggatctcagggtgatgcagaaccctgctgtgtttgtcaggaggagtac 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcggctgaaccaggatctcagggtgatgcagaaccctgctgtgtttgtcaggaggagtac 469
Query: 2116 aatgatggagatgatatcggatcgctcaattgcgggcatttttaccatactgggtgtatt 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aatgatggagatgatatcggatcgctcaattgcgggcatttttaccatactgggtgtatt 529
Query: 2176 aaacagtggctaatgcataagaacctgtgtcccatttgtaagacaacagggttggcaaaa 2235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaacagtggctaatgcataagaacctgtgtcccatttgtaagacaacagggttggcaaaa 589
Query: 2236 tga 2238
|||
Sbjct: 590 tga 592
>gnl|LJGI|TC81348 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (35%)
Length = 918
Score = 176 bits (89), Expect = 4e-43
Identities = 281/345 (81%)
Strand = Plus / Plus
Query: 583 gatactgatggtaggccaggttattctcttgacacccgtcgtgtatcttgtaaaagaaag 642
|||||||||||||||||| ||| |||| | ||||| || || | ||||||||||||||
Sbjct: 70 gatactgatggtaggccaagttcttctttggacactcgacgcatgtcttgtaaaagaaaa 129
Query: 643 gcaattgaacgaagtgttggacaatcttcagatggcggaagttctggctatactcagcat 702
|| ||||| ||| | | |||||||||||||| ||| ||||| |||||| ||||||
Sbjct: 130 gctgttgaaggaaattcgaggcaatcttcagatggtggaggttctagctatagtcagcac 189
Query: 703 acagatggtagcgcatggaacattcttcctactcaggattatgcagggagcatttttaac 762
| ||||||||| || ||| ||| |||||||||||||| |||| || |||| || | |
Sbjct: 190 atagatggtagtgcttggcacacctttcctactcaggatcatgctggaagcagttcaagc 249
Query: 763 agatctgcaccagcagaacaggccaatgcaagacttggactgagtatggggggtggagcc 822
|||||| | ||||||| |||||||||||||| ||| || |||||| || ||||
Sbjct: 250 agatctatttcctcagaacatttaaatgcaagacttggcctgggtgtgggggatgaagcc 309
Query: 823 tctgaaagcattcctgaatcaaatgttgcaggaagctcagaaagcttccacagaaatttc 882
|||||||| ||||||| ||| | ||||||||||||||||||||||||||||| || |||
Sbjct: 310 tctgaaagtgttcctgattcagacgttgcaggaagctcagaaagcttccacaggaacttc 369
Query: 883 cgtttgagggtgaatccttcaagccaacaaattcctgttcctccc 927
||||||||||| |||||||||| |||||||| | |||||||||||
Sbjct: 370 cgtttgagggtaaatccttcaaaccaacaaaattctgttcctccc 414
>gnl|LJGI|FS324032 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (3%)
Length = 579
Score = 159 bits (80), Expect = 9e-38
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 atgcaagggcagagaggtacacttggttccttggctgaaacactagaatttgagtttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgcaagggcagagaggtacacttggttccttggctgaaacactagaatttgagtttgag 559
Query: 61 tatggacctactcaaggtac 80
||||||||||||||||||||
Sbjct: 560 tatggacctactcaaggtac 579
>gnl|LJGI|TC70587 homologue to UniRef100_Q00M83 Cluster: Zinc finger protein 1; n=1;
Glycine max|Rep: Zinc finger protein 1 - Glycine max
(Soybean), partial (6%)
Length = 530
Score = 99.6 bits (50), Expect = 7e-20
Identities = 107/126 (84%)
Strand = Plus / Plus
Query: 2113 tacaatgatggagatgatatcggatcgctcaattgcgggcatttttaccatactgggtgt 2172
|||||||||||||||||||| ||| | || ||||||| ||| || ||||| |||
Sbjct: 5 tacaatgatggagatgatattggaacacttgattgcggccatgatttccatagctactgt 64
Query: 2173 attaaacagtggctaatgcataagaacctgtgtcccatttgtaagacaacagggttggca 2232
|||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||
Sbjct: 65 attaaacagtggcttatgcataagaatctgtgtcccatttgtaagacaacaggcttgtca 124
Query: 2233 aaatga 2238
| ||||
Sbjct: 125 acatga 130
Score = 54.0 bits (27), Expect = 4e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2200 ctgtgtcccatttgtaagacaacagggttggcaaaatga 2238
|||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 418 ctgtgtcccatttgtaagacaacaggcttgtcaacatga 456
>gnl|LJGI|TC66286 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (15%)
Length = 703
Score = 89.7 bits (45), Expect = 7e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 163 catgaatggcaaaacttgagtggatggagcttaggtgagcccagttccagtaatactctg 222
|||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| | |
Sbjct: 489 catgaatggcaaaatttgagtggatggagcttaggcgagccaagttccagtaatacacag 548
Query: 223 aatga 227
|||||
Sbjct: 549 aatga 553
>gnl|LJGI|TC61339 similar to UniRef100_A7P9L8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (37%)
Length = 2557
Score = 85.7 bits (43), Expect = 1e-15
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 1915 catgaccgacacagggatatgcgacttgatgtcgataacatgtcttatgaggaattattg 1974
|||||||| ||||| || ||||| |||||||| ||||||||||||||||||||| |||||
Sbjct: 1886 catgaccggcacagagaaatgcgccttgatgttgataacatgtcttatgaggaactattg 1945
Query: 1975 gctctggaagaacgcattggaaatgtgaatactggattgactgagga 2021
|| ||||||| | || ||| |||||| |||||||||| ||||||
Sbjct: 1946 gcattggaagagcaaataggagatgtgagcactggattgagtgagga 1992
>gnl|LJGI|BP082319
Length = 462
Score = 75.8 bits (38), Expect = 1e-12
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 2123 gagatgatatcggatcgctcaattgcgggcatttttaccatactgggtgtattaaacagt 2182
|||||||||| ||||| ||| |||| ||||| |||| | ||||| |||| || ||||||
Sbjct: 244 gagatgatatgggatccctccgttgctggcatgtttaacgtactgagtgtgttgaacagt 185
Query: 2183 ggctaatgcataagaacctgtgtcccatttgtaagacaaca 2223
||||||||||||||||||||| | |||||||||| |||||
Sbjct: 184 ggctaatgcataagaacctgtat--catttgtaagccaaca 146