Miyakogusa Predicted Gene
- Lj0g3v0173849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0173849.1 tr|A9RXL8|A9RXL8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179181,75.47,9e-19,ARM repeat,Armadillo-type fold;
B56,Protein phosphatase 2A, regulatory B subunit, B56;
SERINE/THREON,CUFF.10913.1
(216 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS356060 similar to UniRef100_A7PLV2 Cluster: Chromosom... 283 2e-76
gnl|LJGI|AU089016 similar to UniRef100_A7PLV2 Cluster: Chromosom... 283 2e-76
gnl|LJGI|TC59277 similar to UniRef100_A7PLV2 Cluster: Chromosome... 283 2e-76
gnl|LJGI|FS359883 weakly similar to UniRef100_A7QBU1 Cluster: Ch... 76 1e-13
gnl|LJGI|TC62561 similar to UniRef100_A7PLV2 Cluster: Chromosome... 52 1e-06
>gnl|LJGI|FS356060 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 651
Score = 283 bits (143), Expect = 2e-76
Identities = 155/159 (97%)
Strand = Plus / Minus
Query: 50 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 499
Query: 110 tgtctataatcttccctgcattggagaaaaatactagaagtcattggaaccaagcggtcc 169
|| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 498 tgcccataatcttccctgcattggagagaaatactagaagtcattggaaccaagcggtcc 439
Query: 170 atagtttgactctaaatgtacagaagattttccaagata 208
||||||||||||||||||||| |||||||||||||||||
Sbjct: 438 atagtttgactctaaatgtacggaagattttccaagata 400
>gnl|LJGI|AU089016 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 619
Score = 283 bits (143), Expect = 2e-76
Identities = 155/159 (97%)
Strand = Plus / Plus
Query: 50 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 183
Query: 110 tgtctataatcttccctgcattggagaaaaatactagaagtcattggaaccaagcggtcc 169
|| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 184 tgcccataatcttccctgcattggagagaaatactagaagtcattggaaccaagcggtcc 243
Query: 170 atagtttgactctaaatgtacagaagattttccaagata 208
||||||||||||||||||||| |||||||||||||||||
Sbjct: 244 atagtttgactctaaatgtacggaagattttccaagata 282
>gnl|LJGI|TC59277 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 760
Score = 283 bits (143), Expect = 2e-76
Identities = 155/159 (97%)
Strand = Plus / Plus
Query: 50 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgttcttatggaataatgatcatattgtgaacttaatcaaacaaaaccgcaaagtgatat 262
Query: 110 tgtctataatcttccctgcattggagaaaaatactagaagtcattggaaccaagcggtcc 169
|| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 263 tgcccataatcttccctgcattggagagaaatactagaagtcattggaaccaagcggtcc 322
Query: 170 atagtttgactctaaatgtacagaagattttccaagata 208
||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 atagtttgactctaaatgtacggaagattttccaagata 361
>gnl|LJGI|FS359883 weakly similar to UniRef100_A7QBU1 Cluster: Chromosome chr1
scaffold_75, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_75, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 709
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 139 aatactagaagtcattggaaccaagcggtccatagtttgactctaaatgtacagaagatt 198
||||||||||| || ||||||||||| ||||||||||||||| ||||||| | |||||||
Sbjct: 709 aatactagaaggcactggaaccaagctgtccatagtttgactttaaatgtgcggaagatt 650
Query: 199 tt 200
||
Sbjct: 649 tt 648
>gnl|LJGI|TC62561 similar to UniRef100_A7PLV2 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 756
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 50 tgttcttatggaataatgatcatattgtgaactt 83
|||| |||||||||||||||||||||| ||||||
Sbjct: 28 tgtttttatggaataatgatcatattgagaactt 61