Miyakogusa Predicted Gene

Lj0g3v0173409.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0173409.1 Non Chatacterized Hit- tr|I1MX81|I1MX81_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49142 PE,89.32,0,L
domain-like,NULL; LRR,Leucine-rich repeat; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL;
seg,NU,NODE_6267_length_2410_cov_78.731537.path2.1
         (1851 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053929 UniRef100_A7P4U1 Cluster: Chromosome chr4 scaf...   387   e-106

>gnl|LJGI|BP053929 UniRef100_A7P4U1 Cluster: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr4 scaffold_6, whole genome shotgun sequence - Vitis
           vinifera (Grape), partial (3%)
          Length = 426

 Score =  387 bits (195), Expect = e-106
 Identities = 258/270 (95%), Gaps = 8/270 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatttcaatttggattgttccttcttctcactttggtcatttgtttgaatgtcggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggcatttcaatttggattgttccttcttctcactttggtcatttgtttgaatgtcggt 217

                                                                       
Query: 61  t-cagttgtttcagatgatggagccacattgtt-agag-atgaagaagtcattcagggat 117
           | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct: 218 tccagttgtttcagatgatggagccacattgttcagagcatgaagaagtcattcagggct 277

                                                                       
Query: 118 gtggaaaacattctatatgattggacag-attcaccatcatcagattattgtgcctggag 176
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 278 gtggaaaacattctatatgattggacagcattcaccatcatcagattattgtgcctggag 337

                                                                       
Query: 177 aggagtcagttgtgataa-tgtcaccttcaat--gttgttgcactcaatctttctgggtt 233
           |||  ||||||||||||| ||||| |||||||   |||||||||||||||||||||||||
Sbjct: 338 aggcatcagttgtgataattgtca-cttcaattgtttgttgcactcaatctttctgggtt 396

                                         
Query: 234 gaatcttgatggcgaaatttcgcctgcaat 263
           ||||||||||||||||||||||||||||||
Sbjct: 397 gaatcttgatggcgaaatttcgcctgcaat 426